Table 4

Genes affected by AZA treatment

19099

19141



Gene

Transcript

Location

Untreated

Treated

Untreated

Treated

IBD

Mapped to polymorphism


PCTK3

NM_212502

chr1:203742262-203768466

2.54

1.42

2.74

1.24

Yes

CR1L

NM_175710

chr1:205886352-205961039

2.21

1.38

2.20

1.49

Yes

KCNK1

NM_002245

chr1:231822688-231871795

1.78

1.11

4.69

2.59

NI

Yes

-

chr4:79778447-79803457

2.47

1.78

2.1

1.27

NA

Yes

-

chr5:173100613-173139917

2.33

1.27

2.08

1.15

Yes

-

chr5:9599989-9600708

3.02

1.58

1.47

1.06

Yes

-

chr6:139658229-139733915

3.16

2.36

3.53

2.53

Yes

Yes

-

chr6:80016628-80042343

3.16

2.36

2.71

1.25

NA

CALN1

NM_001017440

chr7:71159735-71207121

1.51

1.05

5.76

1.76

NA

-

chr11:3036678-3063235

4.64

2.94

4.63

3.18

Yes

Yes

SYT9

NM_175733

chr11:7376868-7440901

2.09

1.31

3.48

2.15

Yes

Yes

VWA5A

NM_001130142

chr11:123521934-123522703

2.02

1.37

2.12

1.37

Yes

P2RX7

NM_002562

chr12:120055848-120087505

2.23

1.08

1.81

1.24

Yes

COL4A2

NM_001846

chr13:109958305-109963202

3.25

1.5

2.58

1.84

Yes

PRKCH

NM_006255

chr14:60959560-61030659

2.17

1.64

1.92

1.43

Yes

DNAJA4

NM_00130182

chr15:76345564-76360674

2.15

1.58

8.56

5.77

Yes

-

chr15:94684325-94711444

3.11

2.13

5.45

3.28

Yes

GAS7

NM_001130831

chr17:10022884-10022981

4.24

2.21

2.13

1.44

Yes

Yes

-

chr17:14190861-14192673

2.37

1.68

2.34

1.60

NI

Yes

C20orf194

NM_001009984

chr20:3179134-3334482

3.47

2.08

1.92

1.45

Yes

-

chr20:46050433-46119516

2.22

1.54

2.48

1.65

NA

-

chr20:46358273-46404570

2.06

1.27

3.15

1.59

NA

Yes

GNAS

NR_002875

chr20:56848505-56882141

6.46

4.14

3.62

2.06

Yes

TMPRSS3

NM_024022

chr21:42665938-42688945

1.47

1.04

4.19

1.43

Yes

-

chr22:28762403-28805154

1.43

1.03

4.25

2.23

Yes

OSBP2

NM_030758

chr22:29598129-29633708

2.41

1.84

2.86

1.71

NI


IBD, identical-by-descent; NA, not available; NI, not informative.

Morcos et al. Genome Biology 2011 12:R25   doi:10.1186/gb-2011-12-3-r25

Open Data