Table 1

Frequency of DNA affinity cohort recognition sequences in accessible and closed genome regions

Affinity cohort

P-values included

Mean number of PWM matches for factors in 5% FDR accessible regions

Mean number of PWM matches for factors in closed genomic regions


-5

P <1e-4.5

1,145

12,344

-4

1e-3.5 > P > 1e-4.5

9,938

96,853

-3

1e-2.5 > P > 1e-3.5

94,126

825,406

-2

1e-1.5 > P > 1e-2.5

811,773

6,596,274


Li et al. Genome Biology 2011 12:R34   doi:10.1186/gb-2011-12-4-r34

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