Additional file 10.

Supplementary Figure S6: comparison of RegBounder to theoretically optimal peaks. Comparison between the peak region sizes obtained by RegBounder (green line) with the theoretically minimal peak region sizes (black line) that could be obtained by a similarly confident peak finding algorithm (Supplementary Methods in Additional file 1) at 50% (left) and 95% (right) confidence. Error-bars representing the median ± standard error of the mean are drawn, but may be smaller than the points used to represent the median and hence not be visible.

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Mermel et al. Genome Biology 2011 12:R41   doi:10.1186/gb-2011-12-4-r41