Table 1 |
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Summary of whole-genome synteny relationships across selected fungal orders |
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Sub-phylum |
Pezizomycotina |
Saccharomycotina |
Taphrinomycotina |
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|
|
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|
Class |
Dothideomycetes |
Eurotiomycetes |
Sordariomycetes |
Leotiomycetes |
Saccharomycetes |
Schizosaccharomycetes |
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|
|
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|
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|
Class |
Order |
Capnodiales |
Pleosporales |
Eurotiales |
Onygenales |
Hypocreales |
Magnaporthales |
Sordariales |
Helotiales |
Saccharomycetales |
Schizosaccharomycetales |
|
|
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|
Dothideomycetes |
Capnodiales |
Meso/150 |
Meso |
Demeso |
Demeso |
Demeso |
None |
Demeso |
Demeso |
None |
None |
|
Pleosporales |
300 |
Meso/120 |
Demeso |
Demeso |
Demeso |
None |
Demeso |
Demeso |
None |
None |
|
|
Eurotiomycetes |
Eurotiales |
370 |
370 |
Demacro/< 160 |
Demacro |
None |
None |
None |
Demeso |
None |
None |
|
Onygenales |
370 |
370 |
150 |
Demacro/< 160 |
None |
None |
None |
Demeso |
None |
None |
|
|
Sordariomycetes |
Hypocreales |
370 |
370 |
370 |
370 |
Macro/170 |
Demeso |
Demeso |
Demeso |
None |
None |
|
Magnaporthales |
370 |
370 |
370 |
370 |
240 |
NA |
Demeso |
Demeso |
None |
None |
|
|
Sordariales |
370 |
370 |
370 |
370 |
225 |
240 |
Demeso |
Demeso |
None |
None |
|
|
Leotiomycetes |
Helotiales |
370 |
370 |
370 |
370 |
340 |
340 |
340 |
Macro/250 |
None |
None |
|
Saccharomycetes |
Saccharomycetales |
500 |
500 |
500 |
500 |
500 |
500 |
500 |
500 |
Demacro/none/250 |
None |
|
Schizosaccharomycetales |
650 |
650 |
650 |
650 |
650 |
650 |
650 |
650 |
650 |
Demacro/none/240 |
|
|
|
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Whole-genome synteny, indicated above the diagonal, was classified as either macrosynteny (macro), degraded macrosynteny (demacro), mesosynteny (meso), degraded mesosynteny (demeso) or no synteny (none). 'NA' indicates lack of sufficient data to perform whole-genome comparisons. Time since divergence between orders, previously predicted within the Ascomycetes [38], is indicated below the diagonal in millions of years. |
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|
Hane et al. Genome Biology 2011 12:R45 doi:10.1186/gb-2011-12-5-r45 |
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