Additional file 4.

Table S3 - the top 20 fusion candidates reported by TopHat-Fusion in the UHR data. The top 20 fusion genes from the Universal Human Reference (UHR) data found by TopHat-Fusion, sorted by the scoring scheme described in Figure 6. Single- and paired-end reads were used separately in order to compare TopHat's ability to find fusions using only single-end reads.

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Kim and Salzberg Genome Biology 2011 12:R72   doi:10.1186/gb-2011-12-8-r72