Table 3

Enrichment of Gene Ontology terms for genes with non-synonymous SNPs

Wheat accession

GO group

GO term

Name

FDR

Genes with non-synonymous mutations


Ld

Biological process

0006412

Translation

0.004

Under-represented

Cellular localization

0005840

Ribosome

Under-represented

0016020

Membrane

0.020

Under-represented

0005623

Cell

0.050

Under-represented

Molecular function

0005198

Structural molecular activity

0.003

Under-represented

Td

Biological process

0009987

Cellular process

0.001

Under-represented

0006629

Lipid metabolic process

0.047

Under-represented

0006091

Generation of precursor metabolites and energy

0.038

Under-represented

Cellular localization

0016020

Membrane

0.001

Under-represented

0009579

Thylakoid

0.048

Under-represented

Molecular function

0003824

Catalytic activity

0.022

Under-represented

0003700

Transcription factor activity

0.045

Over-represented

0016787

Hydrolase activity

0.013

Under-represented

0008270

Zinc ion binding

0.015

Over-represented


Saintenac et al. Genome Biology 2011 12:R88   doi:10.1186/gb-2011-12-9-r88

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