Additional file 8.
Correlation of VCP genotype calls from Agilent SureSelect- and NimbleGen SeqCap-captured (a) and SureSelect 50 Mb- and SeqCap v2.0-captured (b) sequenced genotypes to the Illumina Human660W-Quad v1 SNP chip genotypes with exact sequencing coverages. Correlations for heterozygous, reference homozygous and variant homozygous SNPs (according to the chip genotype call) are presented in separate graphs, though graphs lying near 100% correlation cannot be visualized. The x-axis represents the exact coverage of the sequenced SNPs.
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Sulonen et al. Genome Biology 2011 12:R94 doi:10.1186/gb-2011-12-9-r94