Table 5

Cutoffs for list filtering on simulated reads from the Results section

List size

Mismatch counting in seconds^a

Correct hit

Wrong hit

Total hit

20

136

901,164

1,516

902,680

40

165

901,160

1,462

902,622

60

191

901,165

1,454

902,619

100

279

901,166

1,448

902,614

200

475

901,166

1,447

902,613

500

1,197

901,167

1,450*

902,617

1,000

2,942

901,167

1,450*

902,617

Asterisks indicate increased false-positives produced with large list filtering cutoffs.

Lim et al. Genome Biology 2012 13:R82   doi:10.1186/gb-2012-13-10-r82