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This article is part of a special issue on epigenomics.

Open Access Highly Accessed Method

BSmooth: from whole genome bisulfite sequencing reads to differentially methylated regions

Kasper D Hansen1, Benjamin Langmead12 and Rafael A Irizarry12

Author Affiliations

1 Department of Biostatistics, Johns Hopkins Bloomberg School of Public Health, Baltimore, MD 21205, USA

2 Center for Epigenetics, Johns Hopkins University School of Medicine, Baltimore, MD 21205, USA

Genome Biology 2012, 13:R83  doi:10.1186/gb-2012-13-10-r83

Published: 3 October 2012

Additional files

Additional file 1:

Additional figures. A PDF file containing Figures S1 to S5.

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Open Data

Additional file 2:

Alignment code.

Format: GZ Size: 208KB Download file

Open Data

Additional file 3:

Data analysis code.

Format: GZ Size: 1.9MB Download file

Open Data