This article is part of a special issue on epigenomics.

Open Access Research

Epigenetic interplay between mouse endogenous retroviruses and host genes

Rita Rebollo12, Katharine Miceli-Royer12, Ying Zhang12, Sharareh Farivar12, Liane Gagnier12 and Dixie L Mager12*

  • * Corresponding author: Dixie L Mager dmager@bccrc.ca

  • † Equal contributors

Author Affiliations

1 Terry Fox Laboratory, British Columbia Cancer Agency, 675 West 10th Avenue, Vancouver, BC, V5Z1L3, Canada

2 Department of Medical Genetics, Faculty of Medicine, University of British Columbia, 675 West 10th Avenue, Vancouver, BC, V5Z1L3, Canada

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Genome Biology 2012, 13:R89  doi:10.1186/gb-2012-13-10-r89

Published: 3 October 2012

Additional files

Additional file 1:

ERV dataset before filtering. ERV copies extracted from the distribution analysis (Figure 1) close to gene TSSs.

Format: XLS Size: 50KB Download file

This file can be viewed with: Microsoft Excel Viewer

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Additional file 2:

ERV dataset assayed for methylation. All ERV copies selected for DNA methylation analysis.

Format: XLS Size: 82KB Download file

This file can be viewed with: Microsoft Excel Viewer

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Additional file 3:

Figures S1 to Figure S6. An index is present as the first page that will guide readers through the different figures.

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Open Data

Additional file 4:

All bisulfite sequencing data. Compilation of all bisulfite sequences.

Format: ZIP Size: 466KB Download file

Open Data