Additional file 9.
Figure S6 - the count data of repeat sequences merged into respective classes. All EsCM LV samples (EsCM 1 to 4) were compared against each of the CTRL samples (CTRL 1 to 4) using Fisher's exact test (P < 0.05 in at least 14 comparisons). Green color indicates hypomethylation in EsCM compared to the corresponding CTRL and red color indicates the converse, hypermethylation in EsCM. The color bar on the vertical axis represents families of repeat elements. A consistent pattern of hypomethylation was found only in satellite (SAT) family repeats in EsCM.
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Haider et al. Genome Biology 2012 13:R90 doi:10.1186/gb-2012-13-10-r90