Additional file 9.

Figure S9. Examples of 5hmC-enriched TSS regions along with more typical 5hmC-depleted TSS regions. Two examples of 5hmC-enriched genes are shown on the left (Rnas10 and Tmem139). In comparison, a more typical (5hmC depleted) TSS region is shown on the right for Bckdha and Exosc5. All scales on the Y-axis are from log2 1.5 to -log2 1.5. Individual X-axis scale bars are represented by a black bar. The 5hmC profile is in purple and 5mC in red; the transcription start site (black arrow) and gene structure are also illustrated. Exons are shown as perpendicular lines.

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Thomson et al. Genome Biology 2012 13:R93   doi:10.1186/gb-2012-13-10-r93