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Resolution: standard / high Figure 1.
Clustering, microbial community composition and microbial diversity of samples from
different sampling sites. Composition is displayed as relative abundance, that is, the number of reads assigned
to a genus divided by the total number of reads assigned up to the genus level. (a) Clustering of 20 samples of five healthy subjects. Samples were clustered using UPGMA
with weighted UniFrac as a distance measure. The figure was generated with the interactive
Tree of Life tool (iTOL) [70]. Participating volunteers are numbered HV1 to HV5 followed by the sampled body location.
Colored bars represent the relative abundance of bacterial genera as determined by
barcoded pyrosequencing (details in Materials and methods). (b) Phylogenetic diversity rarefaction curves for communities sampled from the listed
skin locations show differences between armpit, forehead, inner elbow and upper buttock
skin.
Zeeuwen et al. Genome Biology 2012 13:R101 doi:10.1186/gb-2012-13-11-r101 |