Figure 5.

D-galacturonate and D-glucuronate degradation pathways. Reactions involved in the degradation of galacturonate and glucuronate. Items in parentheses next to metabolites indicate metabolite abbreviations, and items in parentheses under enzymes indicate the associated genes. Gene names in black are those in the original iJR904 model, while those in red indicate additional functionality discovered by FOCAL designed experiments that are added to the model to recapitulate experimental results.