Table 3

Inversion prediction in individual NA18507

Method

Minimum number to detect 2

Minimum number to detect 3


High quality alignments

Breakdancer

138

NA

GASV

72

NA

GASVPro-HQ

61

NA

Hydra-HQ

43

NA

All alignments

GASVPro

141

286

GASVPro-Min2

141

286

Hydra

551

752


We report the minimum number of predictions required to predict two or three known inversions from a set of ten previously validated inversions [16]. NA, not applicable.

Sindi et al. Genome Biology 2012 13:R22   doi:10.1186/gb-2012-13-3-r22

Open Data