Table 1 |
||||||
|
DNA-Seq measurements for aneuploid segments |
||||||
|
Deficiency |
First missing base |
Last missing base |
Measured in |
RPM in Df region |
RPM in WT |
Fold difference |
|
|
||||||
|
Df(2L)ED2809/+ |
67365 |
72671 |
Female |
29.5 |
54.3 |
1.84 |
|
Df(2L)ED2809/+ |
67365 |
72671 |
Male |
27.9 |
60.3 |
2.16 |
|
Df(2L)ED62/+ |
480873 |
826788 |
Female |
1,371.5 |
2,912.8 |
2.12 |
|
Df(2L)ED62/+ |
480873 |
826788 |
Male |
1,366.1 |
3,313.8 |
2.43 |
|
Df(2L)ED80/+ |
568095 |
850645 |
Female |
1,168.28 |
2,373.4 |
2.03 |
|
Df(2L)ED80/+ |
568095 |
850645 |
Male |
1,253.1 |
2,691.5 |
2.14 |
|
Df(2L)ED87/+ |
568095 |
852827 |
Female |
1,103.5 |
2,390.5 |
2.17 |
|
Df(2L)ED87/+ |
568095 |
852827 |
Male |
1,177.3 |
2,711.5 |
2.30 |
|
Df(2L)EDHsp60c/+ |
5564618 |
5809650 |
Female |
1,060.5 |
2,151.0 |
2.03 |
|
Df(2L)EDHsp60c/+ |
5564618 |
5809650 |
Male |
1,170.1 |
2,362.2 |
2.02 |
|
Df(2L)ED280/+ |
5801930 |
5907456 |
Female |
447.8 |
922.5 |
2.06 |
|
Df(2L)ED280/+ |
5801930 |
5907456 |
Male |
509.2 |
970.4 |
1.92 |
|
Df(2L)ED292/+ |
5801930 |
5981009 |
Female |
744.8 |
1,510.1 |
2.03 |
|
Df(2L)ED292/+ |
5801930 |
5981009 |
Male |
804.1 |
1,648.5 |
2.05 |
|
Df(2L)ED385/+ |
5980272 |
6465772 |
Female |
1,801.7 |
3,841.6 |
2.13 |
|
Df(2L)ED385/+ |
5980272 |
6465772 |
Male |
2,130.8 |
4,350.7 |
2.04 |
|
Df(2L)ED7007/+ |
6709099 |
6963808 |
Female |
1,989.6 |
2,107.4 |
1.06 |
|
Df(2L)ED7007/+ |
6709099 |
6963808 |
Male |
1,401.4 |
2,308.7 |
1.65 |
|
Df(2L)ED489/+ |
7204186 |
7576637 |
Female |
1,692.6 |
3,338.0 |
1.97 |
|
Df(2L)ED489/+ |
7204186 |
7576637 |
Male |
1,803.2 |
3,485.6 |
1.93 |
|
Df(2L)ED499/+ |
7423765 |
7800182 |
Female |
1,727.3 |
3,337.2 |
1.93 |
|
Df(2L)ED499/+ |
7423765 |
7800182 |
Male |
1,844.5 |
3,514.0 |
1.91 |
|
Df(2L)ED475/+ |
7423915 |
7576637 |
Female |
700.2 |
1,428.4 |
2.04 |
|
Df(2L)ED475/+ |
7423915 |
7576637 |
Male |
786.9 |
1,474.1 |
1.87 |
|
Df(2L)ED478/+ |
7437442 |
7576637 |
Female |
581.2 |
1,309.2 |
2.26 |
|
Df(2L)ED478/+ |
7437442 |
7576637 |
Male |
628.7 |
1,348.3 |
2.14 |
|
Df(2L)ED623/+ |
8403564 |
8700124 |
Female |
1,335.1 |
2,531.3 |
1.90 |
|
Df(2L)ED623/+ |
8403564 |
8700124 |
Male |
1,504.1 |
2,718.2 |
1.81 |
|
Df(2L)ED695/+ |
9699225 |
9918192 |
Female |
929.1 |
1,858.3 |
2.00 |
|
Df(2L)ED695/+ |
9699225 |
9918192 |
Male |
1,009.2 |
2,041.9 |
2.02 |
|
Df(2L)ED775/+ |
12010010 |
12975028 |
Female |
4,424.3 |
7,821.9 |
1.77 |
|
Df(2L)ED775/+ |
12010010 |
12975028 |
Male |
4,758.8 |
8,352.9 |
1.76 |
|
Df(2L)ED776/+ |
12434538 |
12975028 |
Female |
2,086.6 |
4,337.0 |
2.08 |
|
Df(2L)ED776/+ |
12434538 |
12975028 |
Male |
2,347.3 |
4,638.7 |
1.98 |
|
Df(2L)ED777/+ |
12484452 |
12975028 |
Female |
1,997.0 |
3,910.5 |
1.96 |
|
Df(2L)ED777/+ |
12484452 |
12975028 |
Male |
2,387.6 |
4,182.3 |
1.75 |
|
Df(2L)ED793/+ |
13934848 |
14689337 |
Female |
3,324.0 |
6,563.4 |
1.97 |
|
Df(2L)ED793/+ |
13934848 |
14689337 |
Male |
3,619.5 |
7,125.3 |
1.97 |
|
Df(2L)ED800/+ |
14490575 |
15332688 |
Female |
3,750.7 |
6,968.0 |
1.86 |
|
Df(2L)ED800/+ |
14490575 |
15332688 |
Male |
4,032.9 |
7,456.4 |
1.85 |
|
Df(2L)ED1231/+ |
19158440 |
19464056 |
Female |
1,266.4 |
2,533.5 |
2.00 |
|
Df(2L)ED1231/+ |
19158440 |
19464056 |
Male |
1,362.8 |
2,789.8 |
2.05 |
|
Df(2L)ED1305/+ |
20085397 |
20382385 |
Female |
932.4 |
1,831.8 |
1.96 |
|
Df(2L)ED1305/+ |
20085397 |
20382385 |
Male |
1,003.9 |
2,005.4 |
2.00 |
|
Mean |
1.97 |
|||||
|
Standard deviation |
0.21 |
|||||
|
|
||||||
|
WT, wild type. |
||||||
|
Malone et al. Genome Biology 2012 13:R28 doi:10.1186/gb-2012-13-4-r28 |
||||||
