SVs covering intronic repetitive elements correlate with changes in gene expression. Three large intronic deletions (red bars) of repetitive elements (grey bars) correlate with a change in gene expression (right). Asterisks indicate significant change (FDR <0.05). Exons indicated in grey are not used in either strain, according to RNA-seq data.
Simonis et al. Genome Biology 2012 13:r31 doi:10.1186/gb-2012-13-4-r31