Table 2

Genes or regions with mutation(s) in parallel populations

Total number of alleles

Selection conditions


Gene or region

Product

0.1 h-1

0.6 h-1


rpoS

RNA polymerase sigma subunit

12

3 out of 4

3 out of 4

mglD/O

DNA-binding transcriptional regulator

9

3 out of 4

3 out of 4

hfq

RNA-binding protein Hfq

4

2 out of 4

None

cgsD_ig

DNA-binding transcriptional regulator

4

1 out of 4

2 out of 4

cobB*

Deacetylase of acetyl-CoA synthetase, NAD-dependent

2

1 out of 4

1 out of 4

28 to 30 kb with mutY deletion*

Not applicable

2

1 out of 4

1 out of 4

rpoB*

DNA-directed RNA polymerase subunit beta 4068948:4072976 forward

2

1 out of 4

1 out of 4

malT

DNA-binding transcriptional activator/maltotriose-ATP-binding protein

3

3 out of 4

None

inaA_ig

Hypothetical protein BWG_2010

1

1 out of 4

1 out of 4

rpoA

RNA polymerase, alpha subunit

1

2 out of 4

1 out of 4

slyD

FKBP-type peptidyl prolyl cis-trans isomerase (rotamase)

4

None

3 out of 4

xapA

Purine nucleoside phosphorylase II

2

1 out of 4

1 out of 4


*Present only in mutY mutator isolates.

Maharjan et al. Genome Biology 2012 13:R41   doi:10.1186/gb-2012-13-6-r41

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