Additional file 1.

Detecting heterozygous C/T single nucleotide polymorphisms from Bisulfite-seq data. Hypothetical bisulfite-seq data with all labels as in Figure 1. This illustrates detection of a C/T heterozygous position (left), and that the G-strand alleles can be used to associate methylation state of an adjacent cytosine on the opposite strand with two parental alleles.

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Liu et al. Genome Biology 2012 13:R61   doi:10.1186/gb-2012-13-7-r61