Additional file 1.
Table S1 - overview of Mouse ENCODE data. Snapshot of data generated by the Mouse ENCODE Consortium and released through University of California Santa Cruz (UCSC) browser. Vertical axis: cell lines and ex vivo cells and tissues. The originating cell type is shown in parentheses next to each line. For mouse embryonic or fetal tissues, the developmental day of harvest is shown in parentheses. Unless otherwise noted, all other tissues are from adult animals. Horizontal axis: experimental assays, including DNaseI hypersensitivity sites (DNaseI), DNaseI footprints by digital genomic footprinting (DGF); mRNA-seq; DNA replication type by Repli-chIP; modifications to histone H3, including bulk acetylation (H3ac) or modification to specific lysine positions on the H3 tail; ChIP-seq for polymerase (Pol2, Pol2-4H8), histone acetyltransferase p300, and diverse transcrition factors; and ChIP input control (far right lane). Filled cells indicate that an assay has been performed by the indicated production center(s) and data released to UCSC.
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Mouse ENCODE Consortium et al. Genome Biology 2012 13:418 doi:10.1186/gb-2012-13-8-418