Table 4

Structural variants in the FVB/NJ genome

Deletion

Duplication

Inversion

Insertion

Deletion in gain

Deletion + insertion

Inversion + deletion or insertion


Total

15,358

137

67

14,246

58

111

71

Genes

280

109

1

20

2

0

4


Listed are the number of SVs by type, and the number of genes with at least one protein-coding exon overlapping a SV. The following SV types involve more than one SV and have been described by Yalcin et al. [15,28]: a 'deletion in gain' is a deletion that is found within a duplicated region; a 'deletion plus insertion' is a deletion that co-occurs with an insertion; and an 'inversion plus a deletion or insertion' is an inversion flanked by one or more deletions or insertions.

Wong et al. Genome Biology 2012 13:R72   doi:10.1186/gb-2012-13-8-r72

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