Table 2 |
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|
Number of CNV loci covering genomic regions |
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|
Intragenic |
||||||
|
|
||||||
|
Partial gene |
||||||
|
|
||||||
|
Total |
Intergenic |
Total |
Whole gene |
Total |
Stop codon |
|
|
|
||||||
|
Total |
430 |
340 |
90 |
31 |
67 |
29 |
|
Deletion |
226 |
198 |
28 |
8 |
21 |
4 |
|
Duplication |
104 |
62 |
42 |
13 |
33 |
19 |
|
Both |
100 |
80 |
20 |
10 |
12 |
6 |
|
Deletion:duplication ratio |
2.17 |
3.08 |
0.67 |
0.62 |
0.64 |
0.21 |
|
|
||||||
|
All groups are non-overlapping. Subcategories are not additive as a CNV can span several genes and harbor both deletions and duplications in different samples. |
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|
Berglund et al. Genome Biology 2012 13:R73 doi:10.1186/gb-2012-13-8-r73 |
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