Table 6

Polymorphic CNVs in breeds with two samples

Loci matching

Shared loci between breeds

Private loci single breeds



Breed

Samples

reference

Total

Polymorphic

Fixed

Total

Polymorphic

Fixed


Border Terrier

2

274

154

55

99

2

0

2

Boxer

2

327

102

76

26

1

1

0

Cavalier King Charles Spaniel

2

241

182

77

105

7

4

3

Chihuahua

2

249

178

75

103

3

3

0

Dachshund

2

250

172

90

82

8

8

0

English Cocker Spaniel

2

264

165

73

92

1

1

0

English Springer Spaniel

2

216

207

102

105

7

6

1

Finnish Spitz

2

244

176

71

105

10

4

6

German Shepherd

2

267

160

73

87

3

1

2

Labrador Retriever

2

260

168

80

88

2

2

0

Nova Scotia Duck Tolling Retriever

2

237

190

89

101

3

2

1

Poodle

2

248

180

102

78

2

2

0

Sarloos

2

255

168

76

92

7

4

3

Schnauzer

2

261

163

79

84

6

5

1

Swedish Elkhound

2

271

158

85

73

1

0

1

Average

2

257.6

168.2

80.2

88

4.2

2.9

1.3

Wolf

3

267

160

121

39

3

3

0


Total, number of CNVs observed in the breed; Polymorphic, average number of polymorphic CNV sites between samples of the breed; Fixed, number of CNVs found in both samples of the breed.

Berglund et al. Genome Biology 2012 13:R73   doi:10.1186/gb-2012-13-8-r73

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