Table 2 |
||||||
|
Results of the predicted enhancers for experimental validation in the first round of mouse reporter assays |
||||||
|
Coordinates (hg19) |
VISTA ID |
Enhancer activity |
Tissues with enhancer activity |
Reproducibility |
||
|
|
||||||
|
Chr2 |
145339602 |
145341530 |
hs1802 |
Positive |
Midbrain (mesencephalon) |
8/8 |
|
Chr7 |
115451531 |
115454796 |
hs1798 |
Positive |
Eye |
6/9 |
|
Forebrain |
9/9 |
|||||
|
Hindbrain (rhombencephalon) |
6/9 |
|||||
|
Midbrain (mesencephalon) |
6/9 |
|||||
|
Neural tube |
6/9 |
|||||
|
Chr7 |
121967528 |
121971078 |
hs1809 |
Positive |
Forebrain |
9/9 |
|
Hindbrain (rhombencephalon) |
7/9 |
|||||
|
Midbrain (mesencephalon) |
7/9 |
|||||
|
Neural tube |
5/9 |
|||||
|
Chr8 |
106602865 |
106607408 |
hs1800 |
Positive |
Cranial nerve |
8/10 |
|
Dorsal root ganglion |
6/10 |
|||||
|
Midbrain (mesencephalon) |
9/10 |
|||||
|
Trigeminal V (ganglion, cranial) |
8/10 |
|||||
|
Chr11 |
118308306 |
118311240 |
hs1793 |
Negative |
||
|
Chr14 |
57474144 |
57478090 |
hs1791 |
Positive |
Midbrain (mesencephalon) |
15/15 |
|
|
||||||
|
Yip et al. Genome Biology 2012 13:R48 doi:10.1186/gb-2012-13-9-r48 |
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