Table 4 |
||||||
|
Results of the predicted enhancers for experimental validation in the Medaka fish reporter assays |
||||||
|
Coordinates (hg19) |
ID |
Enhancer activity |
Tissues with patterns |
|||
|
|
||||||
|
Chr1 |
39630305 |
39631117 |
+ |
ENH_DISCR_2 |
Positive |
Tectum, fin |
|
Chr1 |
27448948 |
27449785 |
- |
ENH_DISCR_38 |
Negative |
|
|
Chr2 |
64877588 |
64878573 |
- |
ENH_DISCR_16 |
Negative |
Not consistent |
|
Chr2 |
7025939 |
7026794 |
+ |
ENH_DISCR_18 |
Positive |
Telencephalon |
|
Chr2 |
169972473 |
169973432 |
- |
ENH_DISCR_37 |
Positive |
Epidermis |
|
Chr3 |
20009087 |
20009933 |
+ |
ENH_DISCR_14 |
Negative |
Not consistent |
|
Chr3 |
71276246 |
71277150 |
- |
ENH_DISCR_19 |
Negative |
Not consistent |
|
Chr3 |
124305687 |
124306362 |
+ |
ENH_DISCR_34 |
Positive |
Epidermis |
|
Chr3 |
65590259 |
65591167 |
- |
ENH_DISCR_41 |
Positive |
Blood_heart |
|
Chr3 |
141579681 |
141580471 |
+ |
ENH_DISCR_44 |
Weak |
Blood |
|
Chr4 |
109893826 |
109894623 |
- |
ENH_DISCR_24 |
Negative |
Not consistent |
|
Chr6 |
158653651 |
158654413 |
+ |
ENH_DISCR_1 |
Negative |
Not consistent/heart |
|
Chr8 |
91239118 |
91239934 |
- |
ENH_DISCR_17 |
Positive |
Telencephalon |
|
Chr8 |
59770666 |
59771377 |
- |
ENH_DISCR_32 |
Positive |
Telencephalon |
|
Chr10 |
97054745 |
97055495 |
- |
ENH_DISCR_47 |
Positive |
Epidermis |
|
Chr12 |
95567438 |
95568125 |
- |
ENH_DISCR_35 |
Positive |
Blood, ear |
|
Chr12 |
755392 |
756170 |
- |
ENH_DISCR_45 |
Weak |
Epidermis |
|
Chr14 |
35805596 |
35806453 |
+ |
ENH_DISCR_21 |
Positive |
Epidermis, late |
|
Chr15 |
89638466 |
89639233 |
+ |
ENH_DISCR_12 |
Negative |
|
|
Chr17 |
46503536 |
46504314 |
- |
ENH_DISCR_13 |
Positive |
Telencephalon |
|
Chr17 |
34953545 |
34954303 |
+ |
ENH_DISCR_22 |
Weak |
Epidermis, blood |
|
Chr17 |
73347806 |
73348761 |
- |
ENH_DISCR_26 |
Negative |
Not consistent |
|
Chr17 |
76254538 |
76255291 |
+ |
ENH_DISCR_31 |
Weak |
Blood |
|
Chr19 |
33162656 |
33163445 |
- |
ENH_DISCR_40 |
Positive |
Blood |
|
Chr20 |
48293080 |
48293844 |
- |
ENH_DISCR_48 |
Positive |
Epidermis, blood |
|
Chr22 |
28430853 |
28431678 |
- |
ENH_DISCR_25 |
Positive |
Tectum |
|
Chr22 |
21953421 |
21954149 |
+ |
ENH_DISCR_29 |
Positive |
Telencephalon |
|
|
||||||
|
Yip et al. Genome Biology 2012 13:R48 doi:10.1186/gb-2012-13-9-r48 |
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