Additional file 8.
Table S9 - amplified regions in the six cancer cell lines. Sole-search was used to call peaks for TCF7L2 in each of the six cancer cell lines, using input from each line as the specific control. One novel feature of Sole-search is that it provides a list of all amplified regions found in the input control. For each cancer cell line, a worksheet of all amplified regions is provided; column F indicates the fold amplification and column I indicates the chromosomal coordinates of the amplified region
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Frietze et al. Genome Biology 2012 13:R52 doi:10.1186/gb-2012-13-9-r52