Additional file 8: Table S6.

Expression matrix clustered by organ system. Following the TF gene name, FlyBase identifier, and DBD, columns record expression of each TF in each organ system by stage range. The organ system color code is shown in Figure 2 and the number of columns for each organ system reflects the number of stages where the organ system is morphologically detectable (Figure 2). Columns are ordered by organ system according to the organ system number code shown in Table S3 (Additional file 3). A colored box indicates expression and clicking on a colored box will show the number code for the organ system; clicking on a white box will show 0 for not expressed in that organ system at that stage. TFs (rows) are clustered by organ system (1 to 16) with black lines separating the organ system clusters. A TF will appear in a new row for every organ system where it is expressed. All TFs with patterned zygotic expression are included in the matrix. If a TF also shows ubiquitous staining at any stage, this is indicated by colored boxes in the five columns designated organ system 17, ubiquitous. Maternal staining (stages 1 to 3) is indicated by a single gray box with numerical code 18 in the last column of the matrix. In separate tabs, single organ system clusters are shown using numerical organ system codes without the color-coding.

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Hammonds et al. Genome Biology 2013 14:R140   doi:10.1186/gb-2013-14-12-r140