Table 10

ESE density in alternative and constitutive exons
Two-tailed Alternative > constitutive Alternative < constitutive
Dataset end5 end3 end5 end3 end5 end3
ESR 0.84 0.15 0.42 0.92 0.58 0.08
INT2 0.059 0.21 0.97 0.90 0.03 0.10
INT2.400 0.48 0.34 0.76 0.83 0.24 0.17
INT3 0.325 0.832 0.84 0.59 0.16 0.41
INT3.400 0.989 0.8361 0.49 0.58 0.51 0.41
Ke-ESE 2.46E-006 0.00065 0.99 0.99 1.23E-006 0.00032
Ke-ESE400 0.027 0.019 0.99 0.99 0.014 0.0096
PESE 0.0012 0.022 0.99 0.99 0.00061 0.0111
RESCUE 0.029 0.0413 0.015 0.02 0.99 0.98

Numbers represent P values from Mann Whitney U test comparing ESE density in alternative and constitutive exons. We present the results of the two-tailed test and the two alternative one-tailed tests. P values in bold are significant after Bonferonni correction (P <0.05/18). We compare 8,406 alternative exons and 3,249 constitutive ones.

Cáceres and Hurst

Cáceres and Hurst Genome Biology 2013 14:R143   doi:10.1186/gb-2013-14-12-r143

Open Data