Table 9

The correlation between splice site strength and ESE density at 5’ and 3’ ends of exons
5’ 3’
Dataset rho P rho P
ESR -0.047 5.06E-19 -0.059 3.90E-29
INT2 -0.098 1.50E-77 -0.108 8.56E-93
INT2.400 -0.099 6.63E-78 -0.092 2.21E-68
INT3 -0.093 9.12E-69 -0.075 3.38E-46
INT3.400 -0.094 6.76E-71 -0.070 9.01E-40
INT3_ESR -0.091 1.25E-66 -0.060 8.53E-30
INT3_ESR_400 -0.083 2.61E-56 -0.054 3.43E-24
INT3_RESCUE -0.078 2.11E-49 -0.079 1.98E-50
INT3_RESCUE_400 -0.074 1.64E-44 -0.065 1.93E-34
Ke-ESE -0.075 3.73E-46 -0.129 8.84E-132
Ke-ESE400 -0.080 9.16E-52 -0.126 3.95E-126
PESE -0.082 2.26E-54 -0.097 7.87E-75
RESCUE -0.099 5.41E-79 -0.054 1.66E-24

All P values are significant after Bonferonni correction (shown in bold for consistency).

Cáceres and Hurst

Cáceres and Hurst Genome Biology 2013 14:R143   doi:10.1186/gb-2013-14-12-r143

Open Data