Additional file 1.

Sections 1 to 10 and Tables S1 and S2. Additional methods and results referred to in the main text can be found here. Table S1: comparison of transcriptome assemblies. Number of transcripts, genes and respective transcript length statistics for the optimal assemblies generated with Version 2.3 and Version 2.5 of GS Newbler Assembler, and Version 3.0.5 of Mira Assembler and Oases (with Illumina paired-end sequence data). Table S2: numbers of differentially expressed (q > 0.6) genes and transcripts was robust to different numbers of biological replicates.

Format: DOCX Size: 86KB Download file

Ferreira et al. Genome Biology 2013 14:R20   doi:10.1186/gb-2013-14-2-r20