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Patchwork: allele-specific copy number analysis of whole-genome sequenced tumor tissue

Markus Mayrhofer, Sebastian DiLorenzo and Anders Isaksson*

Author Affiliations

Science for Life Laboratory, Department of Medical Sciences, Uppsala University, SE-751 85 Uppsala, Sweden

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Genome Biology 2013, 14:R24  doi:10.1186/gb-2013-14-3-r24

Published: 25 March 2013

Additional files

Additional File 1:

Comparison of TAPS (Tumor Aberration Prediction Suite) and Patchwork analyses of the breast-cancer cell line HCC1954.

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Open Data

Additional File 2:

Patchwork copy number profiles of breast-cancer primary tumor, metastasis, and xenograft, based on sequence data originally published by Ding et al. [26].

Format: PPT Size: 470KB Download file

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Open Data