Table 1

Data used in assemblies and scaffolding

Sequence type

Number of reads, millions

read

length, bp

Total coverage, Gbp

Fragment length, bp

Sequence coverage


Male PET

387

76-114

41

630

200×

Male PET

480

100-114

50

590

243×


Female PET

328

150

49

425

227×


MPET

610

76-101

59

6600

290×

MPET

72

51

3.7

10000

18×

MPET

90

51

4.6

12000

22×

RNA-seq

257

51-76

13

170

NA

Paired end Sanger ESTs

0.18

750

0.135

1100

NA


EST, Expressed sequence tag, MPET, mate-paired end tag; NA, not applicable; seq, sequencing..

Keeling et al. Genome Biology 2013 14:R27   doi:10.1186/gb-2013-14-3-r27

Open Data