|
Resolution: standard / high Figure 3.
Lasso regression results. (a) Scatter plot of the viability scores predicted in the 'leave-one-cell-line-out'
iterations for PI-103 (blue), JAK-i (red), and MEK-i (green) versus the observed ones. For comparability, all the scores were normalized in order to have
zero mean, and unitary standard deviations. Predicted scores were normalized together
with the training-set prediction in the corresponding iteration while observed scores
were normalized drug-wisely. The inserts report average non-null coefficients and
average non-null coefficient rate in the final descriptive models for PI-103 (b),
JAK-i (c), and MEK-i (d) for phosphopeptides whose rate is > 50% (that is, sufficiently
stably included in the optimal models).
Casado et al. Genome Biology 2013 14:R37 doi:10.1186/gb-2013-14-4-r37 |