Table 3

Functional annotation of sequencing reads obtained in sRNA sequencing and HeLa Ago2 IP sequencing.

RNA class

HEK293 sRNA sequencing (18 to 30 nucleotides)

HeLa Ago2 immunoprecipitation sequencing (asynchronous cells)

HeLa Ago2 immunoprecipitation sequencing (mitotic cells)


microRNAs

18.304%

89.750%

82.237%

tRNAs

9.694%

0.204%

0.298%

snRNAs

5.275%

0.029%

0.071%

C/D box snoRNAs

1.751%

0.005%

0.054%

H/ACA box snoRNAs

0.318%

0.026%

0.046%

No annotation

64.658%

9.985%

17.293%


Ago2: Argonaute 2; IP: immunoprecipitation; snRNA: small nuclear RNA; snoRNA: small nucleolar RNA; sRNA: small RNA; tRNA: transfer RNA

Kishore et al. Genome Biology 2013 14:R45   doi:10.1186/gb-2013-14-5-r45

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