Table 1

Genome resources in forest trees

Family

Genus

Species

Sequence

access

Genome

Related publications


Pinaceae

Pinus

taeda (loblolly pine)

[14,19]

Resequenced amplicons

[20]

BACs

[21,22]

[14,19]

Fosmids

[23]

Draft genome complete


Pinus

lambertiana (sugar pine)

[14,19]

Resequenced amplicons

[24]

[23]

Draft genome (in progress)


Pseudotsuga

menziesii (Douglas-fir)

[14,19]

Resequenced amplicons

[25]

[23]

Draft genome (in progress)


Pinus

sylvestris (Scots pine)

[26]

Draft genome (in progress)


Pinus

pinsater (maritime pine)

[26]

Draft genome (in progress)

[14,19]

Resequenced amplicons

[27]


Pinus

sibirica (Siberian pine)

[28]

Draft genome (in progress)


Pinus

radiata (Monterey pine)

Draft genome (in progress)

[14,19]

Resequenced amplicons

[29]


Picea

abies (Norway spruce)

[14,19]

Resequenced amplicons

[30]

[31]

Draft genome complete (restricted)


Picea

glauca (white spruce)

[32]

Draft genome complete

[14,19]

BACs

[33]


Larix

sibirica (Siberian larch)

[28]

Draft genome (in progress)


Salicaceae

Populus

trichocarpa (black cottonwood)

[34]

Genome complete

[6]

[19]

BACs

[35]

Genome resequencing (restricted)

[36]

Populus

tremula (European aspen)

[37]

Draft genome complete


Populus

tremula x tremuloides

[37]

Draft genome complete


Populus

tremuloides (quaking aspen)

[37]

Draft genome complete

[19]

BACs

[38]


Populus

grandidentata (bigtooth aspen)

[37]

Draft genome complete


Populus

nigra (black poplar)

[39]

Draft genome complete (restricted)


Salix

purpurea (purpleosier willow)

[40]

Draft genome complete (restricted)


Myrtaceae

Eucalytpus

grandis (rose gum)

[19]

BACs

[41]

[34]

Draft genome complete

Eucalyptus

globulus (blue gum)

[42]

Draft genome (in progress)


Eucalyptus

camaldulensis (river red gum)

[43]

Draft genome complete

[44]


Corymbia

citriodora (lemon-scented gum)

[45]

Draft genome complete (restricted)


Fagaceae

Quercus

robur (English oak)

[19]

BACs

[46,47]

[48]

Draft genome (in progress)


Castanea

mollissima (Chinese chestnut)

[49]

Draft genome (in progress)

[50]

BACs

[51]


Betulaceae

Betula

nana (dwarf birch)

[52]

Draft genome complete

[53]


Oleaceae

Fraxinus

excelsior (European ash)

[54]

Draft genome complete


Details current genome sequencing projects in forest trees with sequence access information and relevant publications.

Neale et al. Genome Biology 2013 14:120   doi:10.1186/gb-2013-14-6-120