Table 3

Polymorphism resources in forest trees

Family

Genus

Species

SNP

access

Polymorphism

Related Publications


Pinaceae

Pinus

taeda (loblolly pine)

[14,19]

GoldenGate & Infinium iSelect

[95,96]


Pinus

lambertiana (sugar pine)

[14]

GoldenGate array

[24]


Pseudotsuga

menziesii (Douglas-fir)

[14]

GoldenGate array

[25]

[19]

Infinium iSelect

[64]


Pinus

sylvestris (Scots pine)

[14]

GoldenGate array


Pinus

pinsater (maritime pine)

[14]

GoldenGate array

[27,90]


Pinus

radiata (Monterey pine)

[14]

GoldenGate array

[29]


Picea

abies (Norway spruce)

[14]

GoldenGate array

[30]


Picea

glauca (white spruce)

[19]

GoldenGate & Infinium iSelect

[97,98]


Salicaceae

Populus

trichocarpa (black cottonwood)

[19,99]

Infinium iSelect

[100]

Infinium iSelect (Restricted)

[36]

[14]

GoldenGate array

[101]

[19,99]

SNP assay

[102]


Populus

nigra (black poplar)

[14]

GoldenGate array

[103]


Myrtaceae

Eucalytpus

grandis (rose gum)

[104]

DArT high-density array

[105]

[106]

GoldenGate array

[106]


Eucalyptus

camaldulensis (river red gum)

RNA-Seq SNP discovery (restricted)

[107]


Details current genotyping projects in forest trees with data access information and relevant publications.

Neale et al. Genome Biology 2013 14:120   doi:10.1186/gb-2013-14-6-120