Table 3 |
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|
Polymorphism resources in forest trees |
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|
Family |
Genus |
Species |
SNP access |
Polymorphism |
Related Publications |
|
|
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|
Pinaceae |
Pinus |
taeda (loblolly pine) |
GoldenGate & Infinium iSelect |
||
|
|
|||||
|
Pinus |
lambertiana (sugar pine) |
[14] |
GoldenGate array |
[24] |
|
|
|
|||||
|
Pseudotsuga |
menziesii (Douglas-fir) |
[14] |
GoldenGate array |
[25] |
|
|
|
[19] |
Infinium iSelect |
[64] |
||
|
|
|||||
|
Pinus |
sylvestris (Scots pine) |
[14] |
GoldenGate array |
||
|
|
|||||
|
Pinus |
pinsater (maritime pine) |
[14] |
GoldenGate array |
||
|
|
|||||
|
Pinus |
radiata (Monterey pine) |
[14] |
GoldenGate array |
[29] |
|
|
|
|||||
|
Picea |
abies (Norway spruce) |
[14] |
GoldenGate array |
[30] |
|
|
|
|||||
|
Picea |
glauca (white spruce) |
[19] |
GoldenGate & Infinium iSelect |
||
|
|
|||||
|
Salicaceae |
Populus |
trichocarpa (black cottonwood) |
Infinium iSelect |
[100] |
|
|
Infinium iSelect (Restricted) |
[36] |
||||
|
[14] |
GoldenGate array |
[101] |
|||
|
|
SNP assay |
[102] |
|||
|
|
|||||
|
Populus |
nigra (black poplar) |
[14] |
GoldenGate array |
[103] |
|
|
|
|||||
|
Myrtaceae |
Eucalytpus |
grandis (rose gum) |
[104] |
DArT high-density array |
[105] |
|
|
[106] |
GoldenGate array |
[106] |
||
|
|
|||||
|
Eucalyptus |
camaldulensis (river red gum) |
RNA-Seq SNP discovery (restricted) |
[107] |
||
|
|
|||||
|
Details current genotyping projects in forest trees with data access information and relevant publications. |
|||||
|
Neale et al. Genome Biology 2013 14:120 doi:10.1186/gb-2013-14-6-120 |
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