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Resolution: standard / high Figure 2.
Features of sequenced oomycete pathogen genomes. The representative phylogeny depicts oomycete pathogens with sequenced genomes and
was generated using Interactive Tree Of Life (iTOL) with National Center for Biotechnology
Information (NCBI) taxonomy identifiers (branch lengths are arbitrary). Pathogen lifestyles
and major variations in effector gene families are indicated along the tree branches.
Potential loss of particular effector classes in a lineage is indicated by a red cross.
The principal host, genome size, repetitive DNA content (as a percentage of genome
size), gene space (the percentage of the genome encoding genes), number of protein-coding
genes and number and percentage of proteins encoding predicted secreted proteins (secretome)
are indicated from left to right for each pathogen. CRN, Crinkler; ND, not determined.
Pais et al. Genome Biology 2013 14:211 doi:10.1186/gb-2013-14-6-211 |