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Resolution: standard / high Figure 10.
Transcript and H3K27me3 profiles of HKT1 in primed and non-primed plants. (A) mRNA levels of HKT1 (relative to constitutive gene RpII) determined by qPCR in roots
of primed plants (PR, light grey and black bars) or non-primed plants (CR, white and
dark grey bars) 10 days after priming and 4 h after application of 0 (-, control)
or 80 mM NaCl (+, stress treatment). Inset shows very low expression of HKT1 in the
shoots of the same plants. Results are shown separately for three independently primed
and treated plant batches (Rep1-3) each consisting of pooled tissue from 12 plants.
Bars are means ± SE of four pairwise ratios of two technical replicates. Significant
differences between primed and non-primed plants for each condition (+/- salt) are
indicated with * for P <0.05 or ** for P <0.01. (B) H3K27me3 profile over the HKT1 sequence in primed (PR) and non-primed (CR) root
immediately after priming (24h) and 10 days later (10d) as displayed in IGB. The differential
site identified by CHIPDIFF in the 24-h samples is marked with a white box.
Sani et al. Genome Biology 2013 14:R59 doi:10.1186/gb-2013-14-6-r59 |