Table 3

Number and length distribution of transcripts from the tissue-specific read mapping using Cufflinks2

Sequence

Transcript length distribution


Species

Tissue

number

Q0

Q1

Q2

Q3

Q4


N. sylvestris

Flower

53,247

63

796

1,327

2,122

24,850

Leaf

46,114

72

801

1,372

2,216

23,553

Root

46,313

72

826

1,364

2,159

20,215

N. tomentosiformis

Flower

48,043

75

864

1,410

2,200.5

15,607

Leaf

43,743

89

817

1,415

2,249

19,133

Root

44,169

69

832

1,388

2,169

16,753


Sequences that contained the pseudo-base N were excluded. Quartiles are labeled with Q0 to Q4.

Sierro et al. Genome Biology 2013 14:R60   doi:10.1186/gb-2013-14-6-r60

Open Data