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Separating homeologs by phasing in the tetraploid wheat transcriptome

Ksenia V Krasileva1, Vince Buffalo1, Paul Bailey2, Stephen Pearce1, Sarah Ayling2, Facundo Tabbita1, Marcelo Soria13, Shichen Wang4, IWGS Consortium5, Eduard Akhunov4, Cristobal Uauy6 and Jorge Dubcovsky17*

Author Affiliations

1 Dept. Plant Sciences, University of California, Davis, CA 9561, USA

2 The Genome Analysis Centre, Norwich Research Park, Norwich NR4 7UH, UK

3 Microbiology, University of Buenos Aires, INBA-CONICET, Buenos Aires, Argentina

4 Department of Plant Pathology, Kansas State University, Manhattan, KS 66506, USA

5 International Wheat Genome Sequencing Consortium

6 John Innes Centre, Norwich Research Park, Norwich NR4 7UH, UK

7 Howard Hughes Medical Institute, Chevy Chase, MD 20815, USA

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Genome Biology 2013, 14:R66  doi:10.1186/gb-2013-14-6-r66

Published: 25 June 2013

Additional files

Additional file 1:

Members of the International Wheat Sequencing Consortium

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Additional file 2:

Supplemental Tables (Tables S1-S4)

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Additional file 3:

Supplemental Figure S1

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Additional file 4:

Supplemental Figure S2

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Additional file 5:

blast2cap3 program

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Additional file 6:

findorf program

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Additional file 7:

readphaser program

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