Open Access Research

Genome-wide analyses of Shavenbaby target genes reveals distinct features of enhancer organization

Delphine Menoret12, Marc Santolini3, Isabelle Fernandes124, Rebecca Spokony5, Jennifer Zanet12, Ignacio Gonzalez67, Yvan Latapie12, Pierre Ferrer12, Hervé Rouault38, Kevin P White5, Philippe Besse67, Vincent Hakim3, Stein Aerts9, Francois Payre12* and Serge Plaza12*

Author Affiliations

1 Centre de Biologie du Développement, Université de Toulouse, 118 route de Narbonne, Toulouse, F-31062, France

2 CNRS UMR5547, 118 route de Narbonne, Toulouse, F-31062, France

3 Laboratoire de Physique Statistique, CNRS, Université Pierre & Marie Curie, Université Denis Diderot, ENS, 24, rue Lhomond, F-75231 Paris, France

4 Current address: Department of Biology, McGill University, 845 Sherbrooke St W, Montreal, QC H3A 0G4, Canada

5 Institute for Genomics and Systems Biology, Department of Human Genetics, The University of Chicago, 57th St Room, 10100 Chicago, IL 60637, USA

6 Université de Toulouse, INSA, 118 route de Narbonne, Toulouse, F-31062, France

7 Institut de Mathématiques, CNRS UMR5219, 118 route de Narbonne, Toulouse, F-31062, France

8 Current address: Howard Hughes Medical Institute, Janelia Farm Research Campus, 19700 Helix Dr., Ashburn, VA 20147, USA

9 Laboratory of Computational Biology, Center for Human Genetics KU Leuven, O&N I Herestraat 49 - 3000 Leuven, Belgium

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Genome Biology 2013, 14:R86  doi:10.1186/gb-2013-14-8-r86

Published: 23 August 2013

Additional files

Additional file 1:

Supplementary figures.

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Additional file 2:

Legends to the supplementary figures.

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Additional file 3:

Supplementary information (details of experimental procedure, constructs, and so on).

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Additional file 4:

bed files (BS prediction, Chip-seq).

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