MOABS: model based analysis of bisulfite sequencing data
1 Division of Biostatistics, Dan L. Duncan Cancer Center, Houston, TX 77030, USA
2 Department of Molecular and Cellular Biology, Houston, TX 77030, USA
3 Department of Pediatrics and Molecular & Human Genetics, Stem Cells and Regenerative Medicine Center, Baylor College of Medicine, Houston, TX 77030, USA
Genome Biology 2014, 15:R38 doi:10.1186/gb-2014-15-2-r38Published: 24 February 2014
Additional file 1:
The source code for the software MOABS. This version is for archive purpose only. Please download the latest version from website.
Format: ZIP Size: 708KB Download file
Additional file 2: Table S1:
Benchmark for performance of MOABS and BSmooth for reads alignment, methylation call, and differential methylation.
Format: XLSX Size: 51KB Download file
Additional file 3:
The Additional Figures S1 to S5.
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This file can be viewed with: Adobe Acrobat Reader
Additional file 4:
The testing data used for the Credible Difference method validation.
Format: DOCX Size: 47KB Download file
Additional file 5: Table S2:
List of known imprinting DMRs with experimental validation references.
Format: XLS Size: 38KB Download file
This file can be viewed with: Microsoft Excel Viewer
Additional file 6: Table S3:
List of genes with decreased 5hmc and genes with increased 5hmc.
Format: XLSX Size: 45KB Download file
Additional file 7:
This file is the section of additional method.
Format: DOCX Size: 1.5MB Download file