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Conserved developmental transcriptomes in evolutionary divergent species Anup Parikh, Edward Roshan Miranda, Mariko Katoh-Kurasawa, Danny Fuller, Gregor Rot, Lan Zagar, Tomaz Curk, Richard Sucgang, Rui Chen, Blaz Zupan, William F Loomis, Adam Kuspa, Gad Shaulsky Genome Biology 2010, 11: R35
 (17 March 2010)
Transcriptional profiling of Dictyostelium development reveals significant conservation of transcriptional profiles between evolutionarily divergent species.
[Abstract] [Provisional PDF]
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XGAP: a uniform and extensible data model and software platform for genotype and phenotype experiments
Morris A Swertz, K Joeri van der Velde, Bruno M Tesson, Richard A Scheltema, Danny Arends, Gonzalo Vera, Rudi Alberts, Martijn Dijkstra, Paul Schofield, Klaus Schughart, John M Hancock, Damian Smedley, Katy Wolstencroft, Carole Goble, Engbert O de Brock, Andrew R Jones, Helen Parkinson, Coordination of Mouse Informatics Resources Consortium (CASIMIR), Genotype-To-Phenotype Project (GEN2PHEN), Ritsert C Jansen Genome Biology 2010, 11: R27
 (9 March 2010)
XGAP, a software platform for the integration and analysis of genotype and phenotype data.
[Abstract] [Provisional PDF] [PubMed] [Related articles]
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ChIA-PET tool for comprehensive chromatin interaction analysis with paired-end tag sequencing Guoliang Li, Melissa J Fullwood, Han Xu, Fabianus Hendriyan Mulawadi, Stoyan Velkov, Vinsensius Vega, Pramila Nuwantha Ariyaratne, Yusoff Bin Mohamed, Hong-Sain Ooi, Chandana Tennakoon, Chia-Lin Wei, Yijun Ruan, Wing-Kin Sung Genome Biology 2010, 11: R22
  (25 February 2010)
ChIA-PET Tool can be used to process long-range chromatin interaction data. Results are visualized on a user-friendly genome browser.
[Abstract] [Provisional PDF] [PubMed] [Related articles]
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