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Browse Genome Biology for Top 20 most accessed articles for last 30 days

 

 Top 20 most accessed articles for last 30 days / past year / all time         [more info]

1.
Accesses
4386
Method    
Genome-wide prediction of transcription factor binding sites using an integrated model
Kyoung-Jae Won, Bing Ren, Wei Wang
Genome Biology 2010, 11: R7
(22 January 2010)
[Abstract] [Provisional PDF] [PubMed] [Related articles]
2.
Accesses
2643
Software    
PhenomiR: a knowledgebase for microRNA expression in diseases and biological processes
Andreas Ruepp, Andreas Kowarsch, Daniel Schmidl, Felix Buggenthin, Barbara Brauner, Irmtraud Dunger, Gisela Fobo, Goar Frishman, Corinna Montrone, Fabian J Theis
Genome Biology 2010, 11: R6
(20 January 2010)
[Abstract] [Provisional PDF] [PubMed] [Related articles]
3.
Accesses
2603
Method    
NetPath: a public resource of curated signal transduction pathways
Kumaran Kandasamy, S Sujatha Mohan, Rajesh Raju, Shivakumar Keerthikumar, Ghantasala S Sameer Kumar, Abhilash K Venugopal, Deepthi Telikicherla, J Daniel Navarro, Suresh Mathivanan, Christian Pecquet, Sashi Kanth Gollapudi, Sudhir Gopal Tattikota, Shyam Mohan, Hariprasad Padhukasahasram, Yashwanth Subbannayya, Renu Goel, Harrys KC Jacob, Jun Zhong, Raja Sekhar, Vishalakshi Nanjappa, et al.
Genome Biology 2010, 11: R3
(12 January 2010)
[Abstract] [Provisional PDF] [PubMed] [Related articles]
4.
Accesses
2217
Software    
Ultrafast and memory-efficient alignment of short DNA sequences to the human genome
Ben Langmead, Cole Trapnell, Mihai Pop, Steven L Salzberg
Genome Biology 2009, 10(3):R25
(4 March 2009)
[Abstract] [Full text] [PDF] [PubMed] [Related articles] [Cited on BioMed Central]
5.
Accesses
2201
Research    
Rapid chromosome territory relocation by nuclear motor activity in response to serum removal in primary human fibroblasts
Ishita S Mehta, Manelle Amira, Amanda J Harvey, Joanna M Bridger
Genome Biology 2010, 11: R5
(13 January 2010)
[Abstract] [Provisional PDF] [PubMed] [Related articles]
6.
Accesses
2176
Software    
Searching for SNPs with cloud computing
Ben Langmead, Michael C Schatz, Jimmy Lin, Mihai Pop, Steven L Salzberg
Genome Biology 2009, 10(11):R134
(20 November 2009)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]
7.
Accesses
2152
Research    
Accurate normalization of real-time quantitative RT-PCR data by geometric averaging of multiple internal control genes
Jo Vandesompele, Katleen De Preter, Filip Pattyn, Bruce Poppe, Nadine Van Roy, Anne De Paepe, Frank Speleman
Genome Biology 2002, 3(7):research0034.1 - 0034.11
(18 June 2002)
[Abstract] [Full text] [PDF] [PubMed] [Related articles] [Cited on BioMed Central] [1 comment]
8.
Accesses
1818
Method    
Integrating phenotype ontologies across multiple species
Christopher J Mungall, Georgios V Gkoutos, Cynthia L Smith, Melissa A Haendel, Suzanna E Lewis, Michael Ashburner
Genome Biology 2010, 11: R2
(8 January 2010)
[Abstract] [Provisional PDF] [PubMed] [Related articles]
9.
Accesses
1554
Research    
Evaluation of next generation sequencing platforms for population targeted sequencing studies
Olivier Harismendy, Pauline C Ng, Robert L Strausberg, Xiaoyun Wang, Timothy B Stockwell, Karen Y Beeson, Nicholas J Schork, Sarah S Murray, Eric J Topol, Samuel Levy, Kelly A Frazer
Genome Biology 2009, 10(3):R32
(27 March 2009)
[Abstract] [Full text] [PDF] [PubMed] [Related articles] [F1000 Biology] [Cited on BioMed Central]
10.
Accesses
1417
Method    
Gene ontology analysis for RNA-seq: accounting for selection bias
Matthew D Young, Matthew J Wakefield, Gordon K Smyth, Alicia Oshlack
Genome Biology 2010, 11: R14
(4 February 2010)
[Abstract] [Provisional PDF] [PubMed] [Related articles]
11.
Accesses
1292
Research    
Genomic characterization of the Yersinia genus
Peter E Chen, Christopher Cook, Andrew C Stewart, Niranjan Nagarajan, Dan D Sommer, Mihai Pop, Brendan Thomason, Maureen P Kiley Thomason, Shannon Lentz, Nichole Nolan, Shanmuga Sozhamannan, Alexander Sulakvelidze, Alfred Mateczun, Lei Du, Michael E Zwick, Timothy D Read
Genome Biology 2010, 11: R1
(4 January 2010)
[Abstract] [Provisional PDF] [PubMed] [Related articles]
12.
Accesses
1248
Research    
Characterization of X-Linked SNP genotypic variation in globally-distributed human populations
Amanda M Casto, Jun Z Li, Devin Absher, Richard Myers, Sohini Ramachandran, Marcus W Feldman
Genome Biology 2010, 11: R10
(28 January 2010)
[Abstract] [Provisional PDF] [PubMed] [Related articles]
13.
Accesses
1173
Method    
Substantial deletion overlap among divergent Arabidopsis genomes revealed by intersection of short reads and tiling arrays
Luca Santuari, Sylvain Pradervand, Amelia-Maria Amiguet-Vercher, Jerôme Thomas, Eavan Dorcey, Keith Harshman, Ioannis Xenarios, Thomas E Juenger, Christian S Hardtke
Genome Biology 2010, 11: R4
(12 January 2010)
[Abstract] [Provisional PDF] [PubMed] [Related articles]
14.
Accesses
1090
Minireview   
Assembling genomes using short-read sequencing technology
Shaun D Jackman, nanç Birol
Genome Biology 2010, 11(1):202
(28 January 2010)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]
15.
Accesses
950
Method    
Expressed Alu repeats as a novel, reliable tool for normalization of real-time quantitative RT-PCR data
Manuela Marullo, Chiara Zuccato, Caterina Mariotti, Nayana Lahiri, Sarah J Tabrizi, Stefano Di Donato, Elena Cattaneo
Genome Biology 2010, 11: R9
(28 January 2010)
[Abstract] [Provisional PDF] [PubMed] [Related articles]
16.
Accesses
947
Research    
Characterizing the admixed African ancestry of African Americans
Fouad Zakharia, Analabha Basu, Devin Absher, Themistocles L Assimes, Alan S Go, Mark A Hlatky, Carlos Iribarren, Joshua W Knowles, Jun Li, Balasubramanian Narasimhan, Steven Sidney, Audrey Southwick, Richard M Myers, Thomas Quertermous, Neil Risch, Hua Tang
Genome Biology 2009, 10(12):R141
(22 December 2009)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]
17.
Accesses
869
Method    
Methods for analyzing deep sequencing expression data: constructing the human and mouse promoterome with deepCAGE data
Piotr J Balwierz, Piero Carninci, Carsten O Daub, Jun Kawai, Yoshihide Hayashizaki, Werner Van Belle, Christian Beisel, Erik van Nimwegen
Genome Biology 2009, 10(7):R79
(22 July 2009)
[Abstract] [Full text] [PDF] [PubMed] [Related articles] [F1000 Biology]
18.
Accesses
846
Minireview    
Koala retrovirus: a genome invasion in real time
Jonathan P Stoye
Genome Biology 2006, 7(11):241
(21 November 2006)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]
19.
Accesses
834
Method    
De novo genome sequence assembly of a filamentous fungus using Sanger, 454 and Illumina sequence data
Scott DiGuistini, Nancy Y Liao, Darren Platt, Gordon Robertson, Michael Seidel, Simon K Chan, T Roderick Docking, Inanc Birol, Robert A Holt, Martin Hirst, Elaine Mardis, Marco A Marra, Richard C Hamelin, Jörg Bohlmann, Colette Breuil, Steven JM Jones
Genome Biology 2009, 10(9):R94
(11 September 2009)
[Abstract] [Full text] [PDF] [PubMed] [Related articles] [Cited on BioMed Central]
20.
Accesses
776
Method    
A blind deconvolution approach to high-resolution mapping of transcription factor binding sites from ChIP-seq data
Desmond S Lun, Ashley Sherrid, Brian Weiner, David R Sherman, James E Galagan
Genome Biology 2009, 10(12):R142
(22 December 2009)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]
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