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<art>
   <ui>gb-2009-10-8-235</ui>
   <ji>GBJ</ji>
   <fm>
      <dochead>Protein family review</dochead>
      <bibl>
         <title>
            <p>The claudins</p>
         </title>
         <aug>
            <au id="A1"><snm>Lal-Nag</snm><fnm>Madhu</fnm><insr iid="I1"/></au>
            <au ca="yes" id="A2"><snm>Morin</snm><mi>J</mi><fnm>Patrice</fnm><insr iid="I1"/><insr iid="I2"/><email>morinp@mail.nih.gov</email></au>
         </aug>
         <insg>
            <ins id="I1"><p>Laboratory of Cellular and Molecular Biology, National Institute on Aging, Baltimore, National Institutes of Health Biomedical Research Center, MD 21224, USA</p></ins>
            <ins id="I2"><p>Department of Pathology, Johns Hopkins Medical Institutions, Baltimore, MD 21287, USA</p></ins>
         </insg>
         <source>Genome Biology</source>
         <issn>1465-6906</issn>
         <pubdate>2009</pubdate>
         <volume>10</volume>
         <issue>8</issue>
         <fpage>235</fpage>
         <url>http://genomebiology.com/2009/10/8/235</url>
         <xrefbib><pubidlist><pubid idtype="pmpid">19706201</pubid><pubid idtype="doi">10.1186/gb-2009-10-8-235</pubid></pubidlist></xrefbib>
      </bibl>
      <history><pub><date><day>26</day><month>8</month><year>2009</year></date></pub></history>
      <cpyrt><year>2009</year><collab>BioMed Central Ltd</collab></cpyrt>
      <shorttitle>
         <p>The claudins</p>
      </shorttitle>
      <shortabs>
         <p>Claudins are crucial components of tight junctions and are important in regulating permeability and maintaining cell polarity in cell sheets.</p>
      </shortabs>
      <abs>
         <sec>
            <st>
               <p>Summary</p>
            </st>
            <p>The claudin multigene family encodes tetraspan membrane proteins that are crucial structural and functional components of tight junctions, which have important roles in regulating paracellular permeability and maintaining cell polarity in epithelial and endothelial cell sheets. In mammals, the claudin family consists of 24 members, which exhibit complex tissue-specific patterns of expression. The extracellular loops of claudins from adjacent cells interact with each other to seal the cellular sheet and regulate paracellular transport between the luminal and basolateral spaces. The claudins interact with multiple proteins and are intimately involved in signal transduction to and from the tight junction. Several claudin mouse knockout models have been generated and the diversity of phenotypes observed clearly demonstrates their important roles in the maintenance of tissue integrity in various organs. In addition, mutation of some claudin genes has been causatively associated with human diseases and claudin genes have been found to be deregulated in various cancers. The mechanisms of claudin regulation and their exact roles in normal physiology and disease are being elucidated, but much work remains to be done. The next several years are likely to witness an explosion in our understanding of these proteins, which may, in turn, provide new approaches for the targeted therapy of various diseases.</p>
         </sec>
      </abs>
   </fm>
   <meta>
      <classifications>
         <classification id="30010004" subtype="man_spc_id" type="BMC">Cell biology</classification>
         <classification id="30010012" subtype="man_spc_id" type="BMC">Medicine</classification>
      </classifications>
   </meta>
   <bdy>
      <sec>
         <st>
            <p>Gene organization and evolutionary history</p>
         </st>
         <p>In metazoans, biological compartments of different compositions are separated by epithelial (or endothelial) sheets. The transport between these compartments, especially the movement of molecules that can occur in between the cells that make up the cellular sheets (paracellular diffusion), is highly regulated. In vertebrates, the tight junctions (TJs) are the structures responsible for forming the seal that controls paracellular transport. TJs are composed of multiple components, but the tetraspan integral membrane proteins known as claudins are essential for TJ formation and function <abbrgrp><abbr bid="B1">1</abbr></abbrgrp>.</p>
         <p>In mammals, a total of 24 claudin genes have been found (Table <tblr tid="T1">1</tblr>). Humans and chimpanzees have 23 annotated <it>CLDN </it>genes in their genome (they lack <it>CLDN13</it>), whereas mice and rats have all 24. The exact mechanisms of claudin evolution remain unknown, although some data suggest that the claudin multigene family expanded and evolved via gene duplications early in chordate development <abbrgrp><abbr bid="B2">2</abbr></abbrgrp>. Consistent with this hypothesis is the presence of highly homologous <it>CLDN </it>genes located in close proximity in various mammalian genomes (see below). Interestingly, the genome of the puffer fish <it>Takifugu </it>has a large number of claudin genes (at least 56) as the result of extensive gene duplication <abbrgrp><abbr bid="B3">3</abbr></abbrgrp>. Claudin-like genes have been reported in lower chordates (the ascidian <it>Halocynthia roretzi</it>), as well as in invertebrates (<it>Drosophila</it>) <abbrgrp><abbr bid="B4">4</abbr></abbrgrp>, but the exact roles of these claudins in permeability barriers still remain to be elucidated. The presence of these genes suggests that the origin of the claudins may be quite ancient and that a claudin ancestor pre-dates the establishment of the chordates.</p>
         <tbl id="T1"><title><p>Table 1</p></title><caption><p>Gene IDs for claudin genes in commonly studied mammals</p></caption><tblbdy cols="5">
      <r>
         <c ca="left">
            <p>Gene</p>
         </c>
         <c ca="center">
            <p>Human</p>
         </c>
         <c ca="center">
            <p>Chimpanzee</p>
         </c>
         <c ca="center">
            <p>Rat</p>
         </c>
         <c ca="center">
            <p>Mouse</p>
         </c>
      </r>
      <r>
         <c cspan="5">
            <hr/>
         </c>
      </r>
      <r>
         <c ca="left">
            <p>
               <it>CLDN1</it>
            </p>
         </c>
         <c ca="center">
            <p>9076</p>
         </c>
         <c ca="center">
            <p>12738</p>
         </c>
         <c ca="center">
            <p>65129</p>
         </c>
         <c ca="center">
            <p>12737</p>
         </c>
      </r>
      <r>
         <c ca="left">
            <p>
               <it>CLDN2</it>
            </p>
         </c>
         <c ca="center">
            <p>9075</p>
         </c>
         <c ca="center">
            <p>465795</p>
         </c>
         <c ca="center">
            <p>300920</p>
         </c>
         <c ca="center">
            <p>12738</p>
         </c>
      </r>
      <r>
         <c ca="left">
            <p>
               <it>CLDN3</it>
            </p>
         </c>
         <c ca="center">
            <p>1365</p>
         </c>
         <c ca="center">
            <p>742734</p>
         </c>
         <c ca="center">
            <p>65130</p>
         </c>
         <c ca="center">
            <p>12739</p>
         </c>
      </r>
      <r>
         <c ca="left">
            <p>
               <it>CLDN4</it>
            </p>
         </c>
         <c ca="center">
            <p>1364</p>
         </c>
         <c ca="center">
            <p>463464</p>
         </c>
         <c ca="center">
            <p>304407</p>
         </c>
         <c ca="center">
            <p>12740</p>
         </c>
      </r>
      <r>
         <c ca="left">
            <p>
               <it>CLDN5</it>
            </p>
         </c>
         <c ca="center">
            <p>7122</p>
         </c>
         <c ca="center">
            <p>458955</p>
         </c>
         <c ca="center">
            <p>65131</p>
         </c>
         <c ca="center">
            <p>12741</p>
         </c>
      </r>
      <r>
         <c ca="left">
            <p>
               <it>CLDN6</it>
            </p>
         </c>
         <c ca="center">
            <p>9074</p>
         </c>
         <c ca="center">
            <p>467882</p>
         </c>
         <c ca="center">
            <p>287098</p>
         </c>
         <c ca="center">
            <p>54419</p>
         </c>
      </r>
      <r>
         <c ca="left">
            <p>
               <it>CLDN7</it>
            </p>
         </c>
         <c ca="center">
            <p>1366</p>
         </c>
         <c ca="center">
            <p>455232</p>
         </c>
         <c ca="center">
            <p>65132</p>
         </c>
         <c ca="center">
            <p>53624</p>
         </c>
      </r>
      <r>
         <c ca="left">
            <p>
               <it>CLDN8</it>
            </p>
         </c>
         <c ca="center">
            <p>9073</p>
         </c>
         <c ca="center">
            <p>474085</p>
         </c>
         <c ca="center">
            <p>304124</p>
         </c>
         <c ca="center">
            <p>54420</p>
         </c>
      </r>
      <r>
         <c ca="left">
            <p>
               <it>CLDN9</it>
            </p>
         </c>
         <c ca="center">
            <p>9080</p>
         </c>
         <c ca="center">
            <p>+</p>
         </c>
         <c ca="center">
            <p>287099</p>
         </c>
         <c ca="center">
            <p>56863</p>
         </c>
      </r>
      <r>
         <c ca="left">
            <p>
               <it>CLDN10</it>
            </p>
         </c>
         <c ca="center">
            <p>9071</p>
         </c>
         <c ca="center">
            <p>452626</p>
         </c>
         <c ca="center">
            <p>290485</p>
         </c>
         <c ca="center">
            <p>58187</p>
         </c>
      </r>
      <r>
         <c ca="left">
            <p>
               <it>CLDN11</it>
            </p>
         </c>
         <c ca="center">
            <p>5010</p>
         </c>
         <c ca="center">
            <p>460846</p>
         </c>
         <c ca="center">
            <p>84588</p>
         </c>
         <c ca="center">
            <p>18417</p>
         </c>
      </r>
      <r>
         <c ca="left">
            <p>
               <it>CLDN12</it>
            </p>
         </c>
         <c ca="center">
            <p>9069</p>
         </c>
         <c ca="center">
            <p>463521</p>
         </c>
         <c ca="center">
            <p>500000</p>
         </c>
         <c ca="center">
            <p>64945</p>
         </c>
      </r>
      <r>
         <c ca="left">
            <p>
               <it>CLDN13</it>
            </p>
         </c>
         <c ca="center">
            <p>-</p>
         </c>
         <c ca="center">
            <p>-</p>
         </c>
         <c ca="center">
            <p>+</p>
         </c>
         <c ca="center">
            <p>57255</p>
         </c>
      </r>
      <r>
         <c ca="left">
            <p>
               <it>CLDN14</it>
            </p>
         </c>
         <c ca="center">
            <p>23562</p>
         </c>
         <c ca="center">
            <p>470085</p>
         </c>
         <c ca="center">
            <p>304073</p>
         </c>
         <c ca="center">
            <p>56173</p>
         </c>
      </r>
      <r>
         <c ca="left">
            <p>
               <it>CLDN15</it>
            </p>
         </c>
         <c ca="center">
            <p>24146</p>
         </c>
         <c ca="center">
            <p>463619</p>
         </c>
         <c ca="center">
            <p>304388</p>
         </c>
         <c ca="center">
            <p>60363</p>
         </c>
      </r>
      <r>
         <c ca="left">
            <p>
               <it>CLDN16</it>
            </p>
         </c>
         <c ca="center">
            <p>10686</p>
         </c>
         <c ca="center">
            <p>740268</p>
         </c>
         <c ca="center">
            <p>155268</p>
         </c>
         <c ca="center">
            <p>114141</p>
         </c>
      </r>
      <r>
         <c ca="left">
            <p>
               <it>CLDN17</it>
            </p>
         </c>
         <c ca="center">
            <p>26285</p>
         </c>
         <c ca="center">
            <p>474084</p>
         </c>
         <c ca="center">
            <p>304125</p>
         </c>
         <c ca="center">
            <p>239931</p>
         </c>
      </r>
      <r>
         <c ca="left">
            <p>
               <it>CLDN18</it>
            </p>
         </c>
         <c ca="center">
            <p>51208</p>
         </c>
         <c ca="center">
            <p>470935</p>
         </c>
         <c ca="center">
            <p>315953</p>
         </c>
         <c ca="center">
            <p>56492</p>
         </c>
      </r>
      <r>
         <c ca="left">
            <p>
               <it>CLDN19</it>
            </p>
         </c>
         <c ca="center">
            <p>149461</p>
         </c>
         <c ca="center">
            <p>747192</p>
         </c>
         <c ca="center">
            <p>298487</p>
         </c>
         <c ca="center">
            <p>242653</p>
         </c>
      </r>
      <r>
         <c ca="left">
            <p>
               <it>CLDN20</it>
            </p>
         </c>
         <c ca="center">
            <p>49861</p>
         </c>
         <c ca="center">
            <p>472215</p>
         </c>
         <c ca="center">
            <p>680178</p>
         </c>
         <c ca="center">
            <p>621628</p>
         </c>
      </r>
      <r>
         <c ca="left">
            <p>
               <it>CLDN21</it>
            </p>
         </c>
         <c ca="center">
            <p>644672</p>
         </c>
         <c ca="center">
            <p>740287</p>
         </c>
         <c ca="center">
            <p>+</p>
         </c>
         <c ca="center">
            <p>100042785</p>
         </c>
      </r>
      <r>
         <c ca="left">
            <p>
               <it>CLDN22</it>
            </p>
         </c>
         <c ca="center">
            <p>53842</p>
         </c>
         <c ca="center">
            <p>743556</p>
         </c>
         <c ca="center">
            <p>306454</p>
         </c>
         <c ca="center">
            <p>75677</p>
         </c>
      </r>
      <r>
         <c ca="left">
            <p>
               <it>CLDN23</it>
            </p>
         </c>
         <c ca="center">
            <p>137075</p>
         </c>
         <c ca="center">
            <p>472693</p>
         </c>
         <c ca="center">
            <p>290789</p>
         </c>
         <c ca="center">
            <p>71908</p>
         </c>
      </r>
      <r>
         <c ca="left">
            <p>
               <it>CLDN24</it>
            </p>
         </c>
         <c ca="center">
            <p>100132463</p>
         </c>
         <c ca="center">
            <p>471363</p>
         </c>
         <c ca="center">
            <p>100039801</p>
         </c>
         <c ca="center">
            <p>502083</p>
         </c>
      </r>
   </tblbdy><tblfn>
      <p>The GenBank gene ID is given when the <it>CLDN </it>gene is present in the given species. A dash (-) represents the absence of a particular <it>CLDN </it>homolog in the particular species whereas a plus sign (+) signifies that the gene seems to be present in the genome, although it is not yet annotated and assigned a gene ID in GenBank.</p>
   </tblfn></tbl>
         <p>In general, <it>CLDN </it>genes have few introns and several lack introns altogether (Table <tblr tid="T2">2</tblr>). The result of this is that the genes are typically small, on the order of several kilobases (kb). Several pairs of <it>CLDN </it>genes that are very similar to each other in sequence and in intron/exon arrangement are located in close proximity in the human genome, such as <it>CLDN6 </it>and <it>CLDN9</it>, which are located only 200 bp apart on chromosome 16. <it>CLDN22 </it>and <it>CLDN24 </it>on chromosome 4, <it>CLDN8 </it>and <it>CLDN17 </it>on chromosome 21, and <it>CLDN3 </it>and <it>CLDN4 </it>on chromosome 7 are also located within 50 kb of each other. This genomic structure suggests gene duplication as a crucial driving force in the generation of many of these claudins. Whether the genomic arrangement leads to coordinate regulation is currently unknown but, at least in the case of <it>CLDN3 </it>and <it>CLDN4</it>, coordinate expression has been reported in several normal and neoplastic tissues <abbrgrp><abbr bid="B5">5</abbr></abbrgrp>, and expression of these genes is frequently simultaneously elevated in various cancers <abbrgrp><abbr bid="B6">6</abbr></abbrgrp>. The other <it>CLDN </it>genes are dispersed on several human chromosomes, including the X chromosome (Table <tblr tid="T2">2</tblr>).</p>
         <tbl id="T2"><title><p>Table 2</p></title><caption><p>Human claudin genes and transcript information</p></caption><tblbdy cols="7">
      <r>
         <c ca="left">
            <p>Gene</p>
         </c>
         <c ca="center">
            <p>Localization</p>
         </c>
         <c ca="center">
            <p>Introns</p>
         </c>
         <c ca="left">
            <p>Transcript information</p>
         </c>
         <c ca="center">
            <p>Protein size</p>
         </c>
         <c ca="center">
            <p>Molecular weight</p>
         </c>
         <c ca="center">
            <p>Pi</p>
         </c>
      </r>
      <r>
         <c cspan="7">
            <hr/>
         </c>
      </r>
      <r>
         <c ca="left">
            <p>
               <it>CLDN1</it>
            </p>
         </c>
         <c ca="center">
            <p>3q28</p>
         </c>
         <c ca="center">
            <p>3</p>
         </c>
         <c ca="left">
            <p>One form</p>
         </c>
         <c ca="center">
            <p>211</p>
         </c>
         <c ca="center">
            <p>22,744</p>
         </c>
         <c ca="center">
            <p>8.41</p>
         </c>
      </r>
      <r>
         <c ca="left">
            <p>
               <it>CLDN2</it>
            </p>
         </c>
         <c ca="center">
            <p>Xq22</p>
         </c>
         <c ca="center">
            <p>1</p>
         </c>
         <c ca="left">
            <p>One form</p>
         </c>
         <c ca="center">
            <p>230</p>
         </c>
         <c ca="center">
            <p>24,549</p>
         </c>
         <c ca="center">
            <p>8.47</p>
         </c>
      </r>
      <r>
         <c ca="left">
            <p>
               <it>CLDN3</it>
            </p>
         </c>
         <c ca="center">
            <p>7q11</p>
         </c>
         <c ca="center">
            <p>0</p>
         </c>
         <c ca="left">
            <p>One form</p>
         </c>
         <c ca="center">
            <p>220</p>
         </c>
         <c ca="center">
            <p>23,319</p>
         </c>
         <c ca="center">
            <p>8.37</p>
         </c>
      </r>
      <r>
         <c ca="left">
            <p>
               <it>CLDN4</it>
            </p>
         </c>
         <c ca="center">
            <p>7q11</p>
         </c>
         <c ca="center">
            <p>0</p>
         </c>
         <c ca="left">
            <p>One form</p>
         </c>
         <c ca="center">
            <p>209</p>
         </c>
         <c ca="center">
            <p>22,077</p>
         </c>
         <c ca="center">
            <p>8.38</p>
         </c>
      </r>
      <r>
         <c ca="left">
            <p>
               <it>CLDN5</it>
            </p>
         </c>
         <c ca="center">
            <p>22q11</p>
         </c>
         <c ca="center">
            <p>1</p>
         </c>
         <c ca="left">
            <p>Two variants: alternative splicing, coding unaffected</p>
         </c>
         <c ca="center">
            <p>218</p>
         </c>
         <c ca="center">
            <p>23,147</p>
         </c>
         <c ca="center">
            <p>8.25</p>
         </c>
      </r>
      <r>
         <c ca="left">
            <p>
               <it>CLDN6</it>
            </p>
         </c>
         <c ca="center">
            <p>16p13</p>
         </c>
         <c ca="center">
            <p>1</p>
         </c>
         <c ca="left">
            <p>One form</p>
         </c>
         <c ca="center">
            <p>220</p>
         </c>
         <c ca="center">
            <p>23,292</p>
         </c>
         <c ca="center">
            <p>8.32</p>
         </c>
      </r>
      <r>
         <c ca="left">
            <p>
               <it>CLDN7</it>
            </p>
         </c>
         <c ca="center">
            <p>17p13</p>
         </c>
         <c ca="center">
            <p>3</p>
         </c>
         <c ca="left">
            <p>One form</p>
         </c>
         <c ca="center">
            <p>211</p>
         </c>
         <c ca="center">
            <p>22,390</p>
         </c>
         <c ca="center">
            <p>8.91</p>
         </c>
      </r>
      <r>
         <c ca="left">
            <p>
               <it>CLDN8</it>
            </p>
         </c>
         <c ca="center">
            <p>21q22</p>
         </c>
         <c ca="center">
            <p>0</p>
         </c>
         <c ca="left">
            <p>One form</p>
         </c>
         <c ca="center">
            <p>225</p>
         </c>
         <c ca="center">
            <p>24,845</p>
         </c>
         <c ca="center">
            <p>9</p>
         </c>
      </r>
      <r>
         <c ca="left">
            <p>
               <it>CLDN9</it>
            </p>
         </c>
         <c ca="center">
            <p>16p13</p>
         </c>
         <c ca="center">
            <p>1</p>
         </c>
         <c ca="left">
            <p>One form</p>
         </c>
         <c ca="center">
            <p>217</p>
         </c>
         <c ca="center">
            <p>22,848</p>
         </c>
         <c ca="center">
            <p>6.54</p>
         </c>
      </r>
      <r>
         <c ca="left">
            <p>
               <it>CLDN10</it>
            </p>
         </c>
         <c ca="center">
            <p>13q31</p>
         </c>
         <c ca="center">
            <p>1</p>
         </c>
         <c ca="left">
            <p>Two variants: alternative transcription start site, different amino termini</p>
         </c>
         <c ca="center">
            <p>a: 226</p>
         </c>
         <c ca="center">
            <p>24,251</p>
         </c>
         <c ca="center">
            <p>9.24</p>
         </c>
      </r>
      <r>
         <c>
            <p/>
         </c>
         <c>
            <p/>
         </c>
         <c>
            <p/>
         </c>
         <c>
            <p/>
         </c>
         <c ca="center">
            <p>b: 228</p>
         </c>
         <c ca="center">
            <p>24,488</p>
         </c>
         <c ca="center">
            <p>8.32</p>
         </c>
      </r>
      <r>
         <c ca="left">
            <p>
               <it>CLDN11</it>
            </p>
         </c>
         <c ca="center">
            <p>3q26</p>
         </c>
         <c ca="center">
            <p>2</p>
         </c>
         <c ca="left">
            <p>One form</p>
         </c>
         <c ca="center">
            <p>207</p>
         </c>
         <c ca="center">
            <p>21,993</p>
         </c>
         <c ca="center">
            <p>8.22</p>
         </c>
      </r>
      <r>
         <c ca="left">
            <p>
               <it>CLDN12</it>
            </p>
         </c>
         <c ca="center">
            <p>7q21</p>
         </c>
         <c ca="center">
            <p>2</p>
         </c>
         <c ca="left">
            <p>One form</p>
         </c>
         <c ca="center">
            <p>244</p>
         </c>
         <c ca="center">
            <p>27,110</p>
         </c>
         <c ca="center">
            <p>8.8</p>
         </c>
      </r>
      <r>
         <c ca="left">
            <p>
               <it>CLDN14</it>
            </p>
         </c>
         <c ca="center">
            <p>21q22</p>
         </c>
         <c ca="center">
            <p>2</p>
         </c>
         <c ca="left">
            <p>Two variants: alternative splicing, coding unaffected</p>
         </c>
         <c ca="center">
            <p>239</p>
         </c>
         <c ca="center">
            <p>25,699</p>
         </c>
         <c ca="center">
            <p>8.94</p>
         </c>
      </r>
      <r>
         <c ca="left">
            <p>
               <it>CLDN15</it>
            </p>
         </c>
         <c ca="center">
            <p>7q11</p>
         </c>
         <c ca="center">
            <p>4</p>
         </c>
         <c ca="left">
            <p>One form</p>
         </c>
         <c ca="center">
            <p>228</p>
         </c>
         <c ca="center">
            <p>24,356</p>
         </c>
         <c ca="center">
            <p>5.61</p>
         </c>
      </r>
      <r>
         <c ca="left">
            <p>
               <it>CLDN16</it>
            </p>
         </c>
         <c ca="center">
            <p>3q28</p>
         </c>
         <c ca="center">
            <p>4</p>
         </c>
         <c ca="left">
            <p>One form</p>
         </c>
         <c ca="center">
            <p>305</p>
         </c>
         <c ca="center">
            <p>33,836</p>
         </c>
         <c ca="center">
            <p>8.26</p>
         </c>
      </r>
      <r>
         <c ca="left">
            <p>
               <it>CLDN17</it>
            </p>
         </c>
         <c ca="center">
            <p>21q22</p>
         </c>
         <c ca="center">
            <p>0</p>
         </c>
         <c ca="left">
            <p>One form</p>
         </c>
         <c ca="center">
            <p>224</p>
         </c>
         <c ca="center">
            <p>24,603</p>
         </c>
         <c ca="center">
            <p>9.8</p>
         </c>
      </r>
      <r>
         <c ca="left">
            <p>
               <it>CLDN18</it>
            </p>
         </c>
         <c ca="center">
            <p>3q34</p>
         </c>
         <c ca="center">
            <p>4</p>
         </c>
         <c ca="left">
            <p>Two variants: alternative transcription start site, different amino termini</p>
         </c>
         <c ca="center">
            <p>a: 261</p>
         </c>
         <c ca="center">
            <p>27,856</p>
         </c>
         <c ca="center">
            <p>8.39</p>
         </c>
      </r>
      <r>
         <c>
            <p/>
         </c>
         <c>
            <p/>
         </c>
         <c>
            <p/>
         </c>
         <c>
            <p/>
         </c>
         <c ca="center">
            <p>b: 261</p>
         </c>
         <c ca="center">
            <p>27,720</p>
         </c>
         <c ca="center">
            <p>8.39</p>
         </c>
      </r>
      <r>
         <c ca="left">
            <p>
               <it>CLDN19</it>
            </p>
         </c>
         <c ca="center">
            <p>1p34</p>
         </c>
         <c ca="center">
            <p>4</p>
         </c>
         <c ca="left">
            <p>Two variants: alternative splicing, different carboxyl termini</p>
         </c>
         <c ca="center">
            <p>a: 224</p>
         </c>
         <c ca="center">
            <p>23,229</p>
         </c>
         <c ca="center">
            <p>8.48</p>
         </c>
      </r>
      <r>
         <c>
            <p/>
         </c>
         <c>
            <p/>
         </c>
         <c>
            <p/>
         </c>
         <c>
            <p/>
         </c>
         <c ca="center">
            <p>b: 211</p>
         </c>
         <c ca="center">
            <p>22,076</p>
         </c>
         <c ca="center">
            <p>7.52</p>
         </c>
      </r>
      <r>
         <c ca="left">
            <p>
               <it>CLDN20</it>
            </p>
         </c>
         <c ca="center">
            <p>6q25</p>
         </c>
         <c ca="center">
            <p>1</p>
         </c>
         <c ca="left">
            <p>One form</p>
         </c>
         <c ca="center">
            <p>219</p>
         </c>
         <c ca="center">
            <p>23,515</p>
         </c>
         <c ca="center">
            <p>6.98</p>
         </c>
      </r>
      <r>
         <c ca="left">
            <p>
               <it>CLDN21</it>
            </p>
         </c>
         <c ca="center">
            <p>11q23</p>
         </c>
         <c ca="center">
            <p>0</p>
         </c>
         <c ca="left">
            <p>One form</p>
         </c>
         <c ca="center">
            <p>229</p>
         </c>
         <c ca="center">
            <p>25,393</p>
         </c>
         <c ca="center">
            <p>5.37</p>
         </c>
      </r>
      <r>
         <c ca="left">
            <p>
               <it>CLDN22</it>
            </p>
         </c>
         <c ca="center">
            <p>4q35</p>
         </c>
         <c ca="center">
            <p>0</p>
         </c>
         <c ca="left">
            <p>One form</p>
         </c>
         <c ca="center">
            <p>220</p>
         </c>
         <c ca="center">
            <p>25,509</p>
         </c>
         <c ca="center">
            <p>5.37</p>
         </c>
      </r>
      <r>
         <c ca="left">
            <p>
               <it>CLDN23</it>
            </p>
         </c>
         <c ca="center">
            <p>8p23</p>
         </c>
         <c ca="center">
            <p>0</p>
         </c>
         <c ca="left">
            <p>One form</p>
         </c>
         <c ca="center">
            <p>292</p>
         </c>
         <c ca="center">
            <p>31,915</p>
         </c>
         <c ca="center">
            <p>7.51</p>
         </c>
      </r>
      <r>
         <c ca="left">
            <p>
               <it>CLDN24</it>
            </p>
         </c>
         <c ca="center">
            <p>4q35</p>
         </c>
         <c ca="center">
            <p>0</p>
         </c>
         <c ca="left">
            <p>One form</p>
         </c>
         <c ca="center">
            <p>205</p>
         </c>
         <c ca="center">
            <p>22,802</p>
         </c>
         <c ca="center">
            <p>4.87</p>
         </c>
      </r>
   </tblbdy><tblfn>
      <p>The chromosomal localization, intron number, and transcript details are indicated for each of the claudin genes, together with the size (in amino acids), molecular weight (in Da), and isoelectric point (Pi) of their encoded proteins. <it>CLDN10</it>, <it>CLDN18</it>, and <it>CLDN19 </it>have two variants giving rise to slightly different proteins. Only the variants documented in GenBank are indicated and other variants may exist.</p>
   </tblfn></tbl>
         <p>The claudin proteins show a wide range of sequence similarity. Phylogenetic analyses of the human claudins demonstrate very strong sequence relationships between some of them, such as claudin-6 and claudin-9, whereas other claudins are more distantly related (Figure <figr fid="F1">1</figr>). A subdivision of the claudin family into 'classic' and 'non-classic' groups has been suggested from sequence analysis of the mouse claudin proteins <abbrgrp><abbr bid="B7">7</abbr></abbrgrp>. Our analysis with human proteins also suggests that some demarcation can be made between claudins on the basis of sequence homology (Figure <figr fid="F1">1</figr>), although the exact members of the 'classic' and 'non-classic' classes are slightly different from the ones suggested by Krause <it>et al. </it><abbrgrp><abbr bid="B7">7</abbr></abbrgrp> for the mouse proteins. As the expression patterns and functions of claudin proteins become clearer in the future, it may be possible and more appropriate to subdivide the claudins according to these parameters.</p>
         <fig id="F1"><title><p>Figure 1</p></title><caption><p>A phylogenetic tree of full-length human claudin proteins, indicating the relationships between them</p></caption><text>
   <p>A phylogenetic tree of full-length human claudin proteins, indicating the relationships between them. Claudin-10, claudin-18, and claudin-19 have two variants resulting from alternative start sites or splicing (Table 2). Highly similar claudins encoded by genes located in close proximity in the human genome are highlighted in green. As previously suggested <abbrgrp><abbr bid="B7">7</abbr></abbrgrp>, claudins can be divided in two groups in terms of sequence homology (dashed line): the 'classic' human claudins are indicated in red and the 'non-classic' in black. Human claudin protein sequences were obtained from GenBank (see accession numbers in Table <tblr tid="T1">1</tblr>) and aligned using ClustalW 2.0.11, which was also used to calculate phylogenetic distances. The unrooted tree was obtained using Drawtree in PHYLIP version 3.67.</p>
</text><graphic file="gb-2009-10-8-235-1"/></fig>
      </sec>
      <sec>
         <st>
            <p>Characteristic structural features</p>
         </st>
         <p>The claudins belong to the PMP22/EMP/MP20/claudin superfamily of tetraspan membrane proteins (PFAM family 00822) <abbrgrp><abbr bid="B8">8</abbr></abbrgrp>. The 24 mammalian members are 20 to 34 kDa in size, with most about 22 to 24 kDa (see Table <tblr tid="T2">2</tblr> for information on human claudins). The proteins are predicted, on the basis of hydropathy plots, to have four transmembrane helices with their amino- and carboxy-terminal tails extending into the cytoplasm <abbrgrp><abbr bid="B1">1</abbr><abbr bid="B8">8</abbr></abbrgrp> (Figure <figr fid="F2">2</figr>). The typical claudin protein contains a short intracellular cytoplasmic amino-terminal sequence of approximately 4 to 5 residues followed by a large extracellular loop (EL1) of 60 residues, a short 20-residue intracellular loop, another extracellular loop (EL2) of about 24 residues, and a carboxy-terminal cytoplasmic tail (Figure <figr fid="F2">2</figr>). The size of the carboxy-terminal tail is more variable in length; it is typically between 21 and 63 residues, although it can be as large as 106 residues (in the case of claudin-23). The amino acid sequences of the first and fourth transmembrane regions are highly conserved among different claudin isoforms; the sequences of the second and third are more diverse. The first loop contains several charged amino acids and, as such, is thought to influence paracellular charge selectivity <abbrgrp><abbr bid="B9">9</abbr></abbrgrp>. Two highly conserved cysteine residues are present in the first extracellular loop and are hypothesized to increase protein stability by the formation of an intramolecular disulfide bond <abbrgrp><abbr bid="B10">10</abbr></abbrgrp>. It has been suggested that the second extracellular loop, by virtue of its helix-turn-helix motif conformation, can form dimers with claudins on opposing cell membranes through hydrophobic interactions between conserved aromatic residues <abbrgrp><abbr bid="B11">11</abbr></abbrgrp>.</p>
         <fig id="F2"><title><p>Figure 2</p></title><caption><p>Schematic representation of the claudin monomer</p></caption><text>
   <p>Schematic representation of the claudin monomer. The model depicts the conserved structural features of claudins and some of the known interactions and modifications. EL1 and EL2 denote the extracellular loops 1 and 2, respectively. The transmembrane domains 1 to 4 (TM1 to TM4) and the regions important for hepatitis C virus (HCV) entry and <it>Clostridium perfringens </it>enterotoxin (CPE) binding are shown.</p>
</text><graphic file="gb-2009-10-8-235-2"/></fig>
         <p>The region that shows the most sequence and size heterogeneity among the claudin proteins is the carboxy-terminal tail. It contains a PDZ-domain-binding motif that allows claudins to interact directly with cytoplasmic scaffold ing proteins, such as the TJ-associated proteins MUPP1 <abbrgrp><abbr bid="B12">12</abbr></abbrgrp>, PATJ <abbrgrp><abbr bid="B13">13</abbr></abbrgrp>, ZO-1, ZO-2 and ZO-3, and MAGUKs <abbrgrp><abbr bid="B14">14</abbr></abbrgrp>. Furthermore, the carboxy-terminal tail upstream of the PDZ-binding motif is required to target the protein to the TJ complex <abbrgrp><abbr bid="B15">15</abbr></abbrgrp> and also functions as a determinant of protein stability and function <abbrgrp><abbr bid="B8">8</abbr></abbrgrp>. The carboxy-terminal tail is the target of various post-translational modifications, such as serine/threonine and tyrosine phosphorylation <abbrgrp><abbr bid="B16">16</abbr></abbrgrp> and palmitoylation <abbrgrp><abbr bid="B17">17</abbr></abbrgrp>, that can significantly alter claudin localization and function. Most cell types express multiple claudins, and the homotypic and heterotypic interactions of claudins from neighboring cells allow strand pairing and account for the TJ properties <abbrgrp><abbr bid="B18">18</abbr></abbrgrp>, although it appears that heterotypic head-to-head interactions between claudins belonging to two different membranes are limited to certain combinations of claudins <abbrgrp><abbr bid="B19">19</abbr></abbrgrp>.</p>
      </sec>
      <sec>
         <st>
            <p>Localization and function</p>
         </st>
         <p>Claudin proteins were first purified as components of TJs <abbrgrp><abbr bid="B20">20</abbr></abbrgrp> and are now known to be essential components of TJ structure and function. TJs are found at the most apical part of the lateral surface of a sheet of epithelial cells and serve as a continuous paracellular seal between the apical and basolateral sections <abbrgrp><abbr bid="B1">1</abbr><abbr bid="B21">21</abbr></abbrgrp>. When observed by freeze-fracture microscopy, TJs can be seen to be composed of complex networks of strands, which can be extremely variable in terms of number and complexity depending on the cell type. Claudins are the major constituents of these strands and from various lines of evidence it has been suggested that claudins may be organized as hexamers within the TJs <abbrgrp><abbr bid="B22">22</abbr></abbrgrp>.</p>
         <p>Surprisingly, it has been shown that, under certain conditions, claudin proteins can be localized to the cytoplasm in both normal and neoplastic tissues <abbrgrp><abbr bid="B6">6</abbr><abbr bid="B23">23</abbr></abbrgrp>. This cytoplasmic localization may involve claudin phosphorylation <abbrgrp><abbr bid="B24">24</abbr></abbrgrp>. Although the exact roles of cytoplasmic claudin proteins are unknown, they may be related to vesicle trafficking or cell-matrix interactions <abbrgrp><abbr bid="B23">23</abbr></abbrgrp>.</p>
         <p>Studies performed by manipulating claudin levels <it>in vitro </it>have established claudins as being crucial in the regulation of the selectivity of paracellular permeability <abbrgrp><abbr bid="B8">8</abbr><abbr bid="B9">9</abbr><abbr bid="B25">25</abbr></abbrgrp>. Overexpression of various claudins in cell lines affects the epithelial resistance and permeability of different ions, and these changes are dependent on the exact claudins expressed. Site-directed mutagenesis of charged residues has shown that the first extracellular loop has an important role in charge selectivity <abbrgrp><abbr bid="B8">8</abbr></abbrgrp>. For example, substituting a negative charge at residue Lys65 in claudin-4 increases Na<sup>+ </sup>permeability in Madine-Darby canine kidney II cells <abbrgrp><abbr bid="B9">9</abbr></abbrgrp>. Overall, the data from several studies are consistent with a model in which claudin protein levels and combinations within the TJ have a major role in determining paracellular ion selectivity <abbrgrp><abbr bid="B8">8</abbr></abbrgrp>.</p>
         <p>Various mouse models have established the importance of claudins in creating barriers and, in some models, highly specific roles have been demonstrated in particular cell types. For example, the <it>Cldn1 </it>knockout mouse model illustrates the importance of this gene in epidermis TJ function. Claudin-1-deficient mice die soon after birth as a consequence of dehydration from transdermal water loss <abbrgrp><abbr bid="B26">26</abbr></abbrgrp>.</p>
         <p>Claudin-11 deficient mice show deafness because of the disappearance of TJs from the basal cells of the stria vascularis (the lateral secretory wall of the cochlear duct) <abbrgrp><abbr bid="B27">27</abbr><abbr bid="B28">28</abbr></abbrgrp>. Similarly, <it>Cldn14 </it>homozygous knockout mice have hearing loss, probably because of impaired ion selectivity in one of the epithelial layers in direct contact with the hair cells (the reticular lamina) <abbrgrp><abbr bid="B29">29</abbr></abbrgrp>. Loss of claudin-19 in a mouse model leads to behavioral deficits, which seem to be due to the disappearance of TJs from Schwann cells, leading to abnormal nerve conduction along peripheral myelinated fibers <abbrgrp><abbr bid="B30">30</abbr></abbrgrp>.</p>
         <p>Several human diseases have been shown to be caused by mutations in claudin genes. Mutations in the <it>CLDN1 </it>gene result in progressive scaling of the skin and obstruction of bile ducts, known as neonatal sclerosing cholangitis with ichthyosis <abbrgrp><abbr bid="B31">31</abbr></abbrgrp>. The clinical course can vary markedly, from resolution of symptoms to development of liver failure. Mutations in <it>CLDN16 </it>(also known as paracellin-1) cause a rare magnesium wasting disorder characterized by excessive loss of Mg<sup>2+ </sup>due to kidney malfunction and known as familial hypomagnesemia with hypercalciurea and nephrocalcinosis (FHHNC) <abbrgrp><abbr bid="B32">32</abbr></abbrgrp>. <it>CLDN16 </it>expression is restricted to certain junctions of the thick ascending loop of Henle in the kidney, where magnesium and calcium are reabsorbed paracellularly. It is hypothesized that the reduction in cation permeability causes a reduction in the intraluminal electrical gradient necessary to drive magnesium back into the blood. Mutations in <it>CLDN19 </it>are associated with a similar phenotype to that seen in patients with <it>CLDN16 </it>mutations <abbrgrp><abbr bid="B33">33</abbr></abbrgrp>. <it>CLDN19 </it>mutations are also associated with a large number of ocular conditions, such as macular colobomata, nystagmus and myopia. <it>CLDN14 </it>is expressed along the endocochlear epithelium and, when mutated, causes nonsyndromic recessive deafness DFNB29 <abbrgrp><abbr bid="B34">34</abbr></abbrgrp>, similar to the phenotype observed in claudin-14-deficient mice <abbrgrp><abbr bid="B29">29</abbr></abbrgrp>. Without being directly affected by known mutations, other claudin proteins have been implicated in human pathologies. Claudin-3 and claudin-4 are known to be surface receptors for the <it>Clostridium perfringens </it>enterotoxin in the gut <abbrgrp><abbr bid="B35">35</abbr></abbrgrp>, and claudin-1, claudin-6, and claudin-9 are co-receptors for hepatitis C virus (HCV) entry <abbrgrp><abbr bid="B36">36</abbr><abbr bid="B37">37</abbr></abbrgrp>.</p>
         <p>Several claudin proteins have been shown to be abnormally expressed in cancers <abbrgrp><abbr bid="B6">6</abbr></abbrgrp>; for example, claudin-1 is downregulated in breast and colon cancer <abbrgrp><abbr bid="B38">38</abbr><abbr bid="B39">39</abbr></abbrgrp>. These findings are consistent with the long-known fact that TJs are disassembled during tumorigenesis. However, the expression of claudin-3 and claudin-4 has been found to be highly upregulated in multiple cancers <abbrgrp><abbr bid="B6">6</abbr></abbrgrp>. In cancer, over-expressed claudins may have roles in motility, invasion, and survival <abbrgrp><abbr bid="B40">40</abbr></abbrgrp>.</p>
         <p>Claudin function is regulated at multiple levels <abbrgrp><abbr bid="B16">16</abbr><abbr bid="B41">41</abbr></abbrgrp>. Most claudin proteins have potential serine and/or threonine phosphorylation sites in their cytoplasmic carboxy-terminal domains and there are reports suggesting that increased phosphorylation could be associated with changes in barrier function. For example, it has been shown that phosphorylation of claudin-3 and claudin-4 by protein kinase A and C, respectively, results in increased paracellular permeability, possibly because of a mislocalization of claudins <abbrgrp><abbr bid="B24">24</abbr><abbr bid="B42">42</abbr></abbrgrp>. Similarly, lysine deficient protein kinase 4 (WNK4) can phosphorylate multiple claudins and increase paracellular permeability <abbrgrp><abbr bid="B43">43</abbr></abbrgrp>. Overall, several claudins are known to be phosphorylated by kinases <abbrgrp><abbr bid="B16">16</abbr></abbrgrp>. Endocytic recycling of claudin proteins is also a potential mechanism of claudin regulation <abbrgrp><abbr bid="B44">44</abbr></abbrgrp>, and palmitoylation <abbrgrp><abbr bid="B17">17</abbr></abbrgrp> of these proteins has also been found to influence claudin protein stability. At the transcriptional level, transcription factors such as Snail <abbrgrp><abbr bid="B45">45</abbr></abbrgrp> and GATA-4 <abbrgrp><abbr bid="B46">46</abbr></abbrgrp> can bind to the promoter regions of various claudin genes and affect their expression. Furthermore, there is evidence to support the concept that claudins are downregulated both transcriptionally and post-transcriptionally by various growth factors and cytokines <abbrgrp><abbr bid="B16">16</abbr><abbr bid="B47">47</abbr></abbrgrp>.</p>
      </sec>
      <sec>
         <st>
            <p>Frontiers</p>
         </st>
         <p>We are just beginning to unravel the roles of proteins in TJ formation and function. The large number of claudin proteins and the heterogeneity in their patterns of expression emphasize their crucial roles in the development and maintenance of vertebrate tissues. To add to the complexity, it is now becoming apparent that the claudins are intimately involved in signaling to and from the TJ, providing important cues for cell behavior, such as proliferation and differentiation. These molecular pathways are just emerging and will probably become a major focus of research in the field of claudins and TJs. From a practical point of view, a better understanding of TJ formation and regulation may provide novel avenues for the enhancement of drug delivery and absorption. One promising avenue in cancer research is the possible targeting of tumors overexpressing claudin-3 and -4 with the cytotoxic <it>Clostridium perfringens </it>enterotoxin, which specifically binds these proteins <abbrgrp><abbr bid="B6">6</abbr></abbrgrp>. Similarly, the identification of claudins as receptors for HCV entry suggests these molecules as possible targets for drugs that inhibit HCV infection <abbrgrp><abbr bid="B37">37</abbr></abbrgrp>. In addition to improving our knowledge of the mechanisms important in normal tissue development and maintenance, a better understanding of claudin biology may therefore provide new avenues for targeted therapies of several diseases.</p>
      </sec>
   </bdy>
   <bm>
      <ack>
         <sec>
            <st>
               <p>Acknowledgements</p>
            </st>
            <p>We thank members of our laboratory for helpful comments on the manuscript. This work was supported entirely by the Intramural Research Program of the National Institutes of Health, National Institute on Aging.</p>
         </sec>
      </ack>
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