Genes acquired in H. pylory J99 JHP0045 JHP0046 JHP0131 JHP0164 JHP0165 ORF7 JHP0563 JHP0629 JHP0630 PE677 JHP0755 JHP0926 JHP0927 JHP0928 JHP0932 JHP0933 JHP0934 JHP0940 JHP0944 JHP0945 JHP0947 JHP0949 JHP0954 JHP0956 JHP1049 RES_1 PE1308 JHP1408 Genes acquired in H. pylory 26695 HP0053 HP0054 HP0091 HP0344 HP0346 HP0428 HP0431 HP0432 HP0433 HP0434 HP0435 HP0437 HP0444 HP0447 HP0449 HP0452 HP0453 HP0454 HP0464 HP0670 HP0673 HP0856 HP0897 HP0982 HP0986 HP0988 HP0994 HP0998 HP1002 HP1003 HP1096 HP1193 HP1209 HP1283 HP1381 HP1425 HP1516 HP1519 HP1520 HP1535 HP1537 HP1586 Genes acquired in S. pneumoniae R6 SPR0073 ARGG ARGH SPR0107 SPR0108 SPR0113 SPR0114 SPR0117 SPR0119 SPR0193 SPR0257 SPR0299 CPS2H CPS2I CPS2J CPS2P SPR0328 SPR0491 SPR0493 SPR0703 SPR0730 SPR0787 SPR0814 PE854 SPR0901 RFFD SPR0962 SPR0963 SPR0964 SPR0965 SPR0966 SPR0967 SPR0968 NIKS SPR1016 SPR1093 LEUB SPR1179 SPR1184 SPR1190 APPA SPR1195 SPR1213 SPR1309 SPR1403 SPR1478 NANA SPR1549 PE1618 SPR1642 SPR1857 SPR1983 PE1981 Genes acquired in S. pneumoniae TGR4 SP0138 SP0166 SP0167 SP0277 SP0298 SP0347 SP0348 SP0349 SP0351 SP0352 SP0353 SP0354 SP0355 SP0356 SP0357 SP0359 SP0360 SP0380 SP0462 SP0463 SP0464 SP0540 SP0543 SP0570 SP0666 SP0826 SP0889 SP0891 SP1061 SP1063 SP1064 SP1065 SP1130 SP1134 SP1135 SP1137 SP1139 SP1142 SP1145 SP1189 SP1292 SP1328 SP1401 SP1620 SP1622 SP1755 SP1757 SP1758 SP1760 SP1761 SP1762 SP1767 SP1768 SP1772 SP1793 SP1796 SP1818 SP2093 Genes acquired in E. coli Sakai (recent LGT) ECS0219 ECS0235 ECS0239 ECS0272 ECS0286 ECS0308 ECS0353 ECS0547 ECS0604 ECS0808 ECS0817 ECS0821 ECS0822 ECS0823 ECS0914 ECS1056 ECS1066 ECS1072 ECS1078 ECS1092 ECS1119 ECS1168 ECS1173 ECS1183 ECS1184 ECS1189 ECS1193 ECS1198 ECS1210 ECS1216 ECS1226 ECS1306 ECS1318 ECS1320 ECS1329 ECS1334 ECS1335 ECS1363 ECS1365 ECS1379 ECS1385 ECS1400 ECS1418 ECS1519 ECS1525 ECS1528 ECS1535 ECS1536 ECS1538 ECS1567 ECS1576 ECS1579 ECS1585 ECS1624 ECS1661 ECS1787 ECS1790 ECS1947 ECS1969 ECS1988 ECS2142 ECS2200 ECS2202 ECS2213 ECS2227 ECS2253 ECS2256 ECS2263 ECS2266 ECS2270 ECS2333 ECS2526 ECS2621 ECS2630 ECS2648 ECS2704 ECS2758 ECS2793 ECS2799 ECS2800 ECS2834 ECS2965 ECS2971 ECS2994 ECS3003 ECS3237 ECS3484 ECS3636 ECS3783 ECS3851 ECS3864 ECS3934 ECS4536 ECS4658 ECS4659 ECS4814 ECS4943 ECS4945 ECS4946 ECS4947 ECS4952 ECS4953 ECS4954 ECS4955 ECS4958 ECS4959 ECS4960 ECS4964 ECS4968 ECS4969 ECS4970 ECS4971 ECS4973 ECS4974 ECS4977 ECS4979 ECS4981 ECS4982 ECS4983 ECS4984 ECS4985 ECS4986 ECS4989 ECS4990 ECS4998 ECS5291 Genes acquired in E. coli EDL933 (recent LGT) Z0039 Z0265 Z0341 Z0345 Z0393 Z0414 Z0655 Z0701 Z0855 Z0884 Z0899 Z0959 Z0962 Z1018 Z1060 Z1127 Z1138 Z1154 Z1156 Z1157 Z1179 Z1182 Z1219 Z1336 Z1361 Z1441 Z1443 Z1444 Z1445 Z1447 Z1456 Z1518 Z1532 Z1540 Z1541 Z1566 Z1577 Z1593 Z1595 Z1596 Z1618 Z1621 Z1805 Z1838 Z1839 Z1919 Z2052 Z2087 Z2123 Z2255 Z2256 Z2263 Z2325 Z2367 Z2368 Z2519 Z2558 Z3066 Z3069 Z3136 Z3242 Z3270 Z3329 Z3374 Z3388 Z3619 Z3731 Z3767 Z3849 Z3951 Z3962 Z4034 Z4088 Z4177 Z4183 Z4250 Z4320 Z4323 Z4327 Z4331 Z4398 Z4474 Z4773 Z4775 Z4906 Z5027 Z5201 Z5226 Z5294 Z5334 Z5401 Z5430 ECNA Z5852 Z5883 Z5889 Z5891 Z5903 Z5924 Z5978 Z6023 Z6043 Genes acquired in E. coli EDL933 ("ancient" LGT) Z0020 Z0025 YADC Z0245 Z0246 Z0247 Z0249 Z0250 Z0251 Z0252 Z0253 Z0257 Z0258 Z0261 Z0308 Z0319 Z0325 Z0326 Z0327 Z0328 Z0330 Z0331 PSUI SIDI Z0337 Z0339 Z0340 Z0367 Z0373 Z0390 Z0442 Z0443 Z0491 Z0502 Z0521 Z0609 Z0615 Z0639 Z0705 Z0706 Z0891 Z0892 Z0893 Z0894 Z0896 Z0898 Z0948 Z0949 Z0952 Z0958 Z0986 Z0989 Z0990 Z1019 Z1096 Z1097 Z1098 Z1121 Z1128 Z1129 Z1131 URED UREC UREE UREF Z1155 Z1161 Z1162 TERW Z1165 Z1166 Z1167 Z1168 Z1169 Z1170 TERZ TERA TERB TERD TERE Z1193 Z1194 Z1195 Z1200 Z1201 Z1202 Z1205 Z1206 Z1209 Z1214 Z1323 Z1328 Z1337 Z1346 Z1348 Z1353 Z1357 Z1358 Z1360 Z1362 Z1363 Z1365 Z1368 Z1370 Z1373 Z1383 Z1385 Z1386 Z1428 Z1432 BETW Z1451 Z1453 Z1457 Z1460 STX2A Z1471 Z1475 Z1476 Z1477 Z1478 Z1479 Z1482 Z1483 Z1486 Z1487 Z1488 Z1490 Z1491 Z1494 Z1495 Z1501 Z1503 Z1516 Z1517 Z1539 Z1542 Z1543 Z1548 Z1550 Z1551 Z1553 Z1554 Z1555 Z1556 Z1560 Z1567 Z1568 Z1570 URED_2 UREC_2 UREE_2 UREF_2 Z1594 Z1600 Z1601 TERW_2 Z1604 Z1605 Z1606 Z1607 Z1608 Z1609 TERZ_2 TERA_2 TERB_2 TERD_2 TERE_2 Z1633 Z1634 Z1635 Z1640 Z1641 Z1642 Z1645 Z1646 Z1649 Z1654 Z1768 Z1774 Z1780 Z1782 Z1787 Z1797 Z1802 Z1803 Z1804 Z1806 Z1809 Z1811 Z1812 Z1814 Z1816 Z1817 Z1818 Z1823 Z1824 Z1840 Z1841 Z1844 Z1847 Z1849 Z1869 Z1876 Z1908 Z1928 Z1929 Z1930 PRRA Z1963 Z1966 Z2041 Z2049 Z2053 Z2058 Z2060 Z2075 Z2077 Z2080 Z2088 Z2094 Z2098 Z2102 Z2107 Z2119 Z2121 Z2127 Z2130 Z2149 Z2150 Z2151 Z2164 Z2240 Z2310 Z2312 Z2337 Z2338 Z2339 Z2370 Z2378 Z2382 Z2384 Z2386 Z2387 Z2389 Z2560 Z2565 Z2800 COXT Z2979 Z2980 Z2987 Z3071 Z3072 Z3084 ANTU Z3108 Z3118 Z3123 INTU Z3156 WBDP WZX WZY Z3307 Z3322 Z3325 Z3327 Z3328 Z3331 Z3332 Z3333 ANTV Z3341 STX1A Z3347 Z3348 Z3351 Z3355 Z3359 Z3360 Z3362 Z3366 Z3370 Z3373 Z3496 Z3614 Z3616 Z3617 Z3618 Z3620 Z3625 Z3672 Z3918 Z3919 Z3920 Z3921 Z3926 Z3929 Z3935 Z3939 Z3940 Z3941 Z3942 Z3943 Z3945 Z3947 Z4090 Z4314 Z4316 Z4317 Z4318 Z4322 Z4324 Z4326 Z4329 Z4332 Z4333 Z4337 Z4340 Z4382 Z4787 Z4799 Z4801 Z4810 Z4811 Z4823 Z4850 Z4851 Z4852 Z4855 Z4856 Z4858 Z4860 Z4861 Z4862 CHUS CHUA Z4912 CHUX CHUY Z5009 Z5098 ESPF ESPB ESPD TIR Z5113 Z5115 SEPQ Z5123 Z5125 Z5136 Z5137 Z5142 Z5160 Z5162 Z5163 Z5211 Z5212 Z5214 Z5331 Z5335 Z5415 Z5428 Z5429 Z5474 Z5475 Z5686 Z5688 Z5692 Z5878 Z5881 Z5884 Z5886 Z5887 Z5892 Z5894 Z5895 Z5896 Z5897 Z5898 Z5899 Z5900 Z5901 Z5902 Z5935 Z5943 Z5944 Z5946 Z5948 Z5950 Z5954 Z6010 Z6011 Z6016 Z6020 Z6021 Z6024 Z6025 Z6036 Z6037 Z6039 Z6042 Z6044 Z6045 Z6046 ANTP Z6055 Z6064 Z6065 Genes acquired in E. coli K12 YI81_1 YADC YAEI B0165 YKFB YAFY YKFC TRS5_1 YAGA YAGH YAGJ YAGK YAGL YAGM INTF B0332 YAIO YAIP YAIS YBBC B0538 TRS5_2 YI81_2 TRS5_3 B0667 B0669 B0671 YBGG YBIA YCDF YCDV B1121 YMFD YMFE LIT YMFJ B1146 YMFL YMFR B1152 B1153 MCRA B1163 B1172 TPR TRS5_4 B1368 TRS5_5 FEAR TYNA MAOC YDBO YDBP B1391 B1396 B1398 B1399 B1565 B1567 TRS5_6 B2001 TRS5_7 YEFJ WBBK WBBI WBBH RFBX B2071 B2191 TRS5_8 ATOA ATOE YFBN B2274 B2275 B2352 YFDN B2359 B2360 B2361 YI81_3 B2443 B2444 B2447 B2449 B2450 YFJH YFJJ YFJK YFJL YFJN YFJR B2635 B2636 YFJT YFJW YGCK B2760 B2856 YGHD YGHE B2970 B2973 B2974 GLCB GLCF B2981 TRS5_9 YGHQ YGHR YGHS YGHT B3027 TRS5_10 PINO YHED YHEE YHEF YHEI YHEJ YHEK PSHM YHEB YHFS YHFT YHFX YHFZ TRS5_11 YI5A RFAL RFAK RFAS YIEJ YIEL YIEC BGLG YJGY YI41 FECA FECR YJIT MCRC MCRB YJJJ Genes acquired in S. enterica STY0293 STY0295 STY0307 STY0311 STY0312 STY0314 STY0318 STY0322 STY0326 STY0327 STY0345 STY0346 STY0347 STY0348 STY0350 STY0385 STY0823 STY0916 STY0945 STY0947 STY0965 STY1015 STY1017 STY1026 STY1027 STY1029 STY1045 STY1046 STY1047 STY1048 STY1049 STY1050 STY1051 STY1052 STY1053 STY1055 STY1056 STY1057 STY1058 STY1059 STY1060 STY1061 STY1062 STY1064 STY1066 STY1067 STY1068 STY1070 STY1071 STY1076 STY1293 STY1359 STY1360 STY1362 STY1364 STY1365 STY1413 STY1499 STY1595 STY1600 STY1601 STY1602 STY1603 STY1604 STY1611 STY1614 STY1615 STY1616 STY1617 STY1618 STY1619 STY1620 STY1648 PE218 PE219 STY1877 STY1879 STY1880 STY1886 STY1887 STY1890 STY1891 STY1974 STY2003 STY2015 STY2016 STY2019 STY2020 STY2021 STY2023 STY2025 STY2026 STY2027 STY2028 STY2029 STY2030 STY2031 STY2035 STY2036 STY2037 STY2038 STY2039 STY2040 STY2041 STY2044 STY2047 STY2050 STY2053 STY2055 STY2056 STY2057 STY2058 STY2059 STY2104 STY2210 STY2217 STY2349 STY2350 STY2351 STY2352 STY2353 STY2355 STY2357 STY2358 STY2361 STY2362 STY2363 STY2364 STY2457 STY2516 STY2747 STY2749 STY2750 STY2875 STY2879 STY2905 STY2919 STY3029 STY3091 STY3092 STY3188 STY3191 STY3192 STY3193 STY3274 STY3277 STY3278 STY3280 STY3285 STY3288 STY3289 STY3343 STY3344 STY3345 STY3347 STY3614 STY3659 STY3671 STY3672 STY3673 STY3948 STY3949 STY3950 STY4012 STY4039 STY4074 STY4075 STY4163 STY4175 STY4207 STY4216 STY4217 STY4414 STY4415 STY4521 STY4523 STY4525 STY4526 STY4528 STY4529 STY4534 STY4539 STY4541 PE165 STY4543 STY4546 STY4547 STY4550 'PILV2 STY4552 STY4553 STY4554 STY4557 STY4558 STY4559 STY4560 STY4562 STY4563 STY4565 STY4566 STY4568 STY4569 STY4570 STY4571 STY4572 STY4573 STY4576 STY4577 STY4579 STY4587 STY4589 STY4591 STY4592 STY4593 STY4594 STY4629 STY4630 STY4631 STY4651 STY4652 STY4654 STY4656 STY4659 STY4662 STY4664 STY4665 STY4666 STY4669 STY4670 STY4671 STY4672 STY4674 STY4675 STY4677 STY4679 STY4686 STY4755 STY4756 STY4792 STY4810 STY4822 STY4823 STY4824 STY4825 STY4827 STY4830 STY4832 STY4833 STY4834 PE241 STY4839 STY4841 STY4845 STY4852 STY4853 STY4854 STY4864 STY4871 STY4941 Genes acquired in S. typhymurium CCDA FINO ORF5 ORF6 PARA PARB PE35 PSIA PSIB PSLT024 PSLT025 PSLT026 PSLT030 PSLT033 PSLT042 PSLT043 PSLT047 PSLT056 PSLT061 PSLT068 PSLT087 REPA REPA2 REPA3 RLGA SPVA SPVB SPVC TAP TLPA TRAB TRAC TRAD TRAE TRAF TRAG TRAH TRAI TRAJ TRAK TRAN TRAP TRAQ TRAS TRAT TRAU TRAV TRAW TRAX TRBB TRBC TRBH STM0099 STM0159 STM0277 STM0284 STM0293 STM0294 STM0295 STM0324 STM0332 PE21 STM0538 STM0571 STM0573 STM0672 STM0809 STM0839 YBIV(1) YBIV(2) NANH STM0898 STM0900 STM0902 STM0909 STM0910 STM0911 STM0912 STM0913 STM0914 STM0915 STM0916 STM0918 STM0921 STM0922 STM0923 STM0925 STM0954 STM1023 STM1030 STM1031 STM1032 STM1033 STM1036 STM1038 STM1041 STM1045 STM1046 STM1047 STM1048 STM1055 ENVF STM1281 STM1485 STM1552 STM1629 STM1630 STM1650 STM1896 STM1933 STM2007 STM2008 CBIK STM2137 STM2236 STM2238 YFEL STM2566 GOGB STM2585 STM2587 STM2589 STM2590 STM2591 STM2592 STM2594 STM2597 STM2600 STM2603 STM2605 STM2606 STM2607 STM2608 STM2617 STM2618 STM2724 STM2726 STM2741 STM2742 STM2743 STM2745 STM2746 STM2747 STM2754 STM2757 STM2761 STM2762 FLJA STM2766 STM2767 AVRA STM3079 STM3085 STM3118 STM3154 STM3278 STM3291 STM3343 STM3521 STM3528 STM3595 YIBR STM3745 SUGR STM3773 YSDA YSDB STM3845 STM3846 SPF STM4008 STM4157 STM4186 STM4195 STM4196 STM4197 STM4198 STM4199 STM4255 STM4372 SRFJ STM4420 STM4422 STM4424 STM4425 STM4427 STM4429 STM4430 STM4434 STM4435 STM4436 STM4490 STM4491 STM4492 STM4493 STM4494 STM4495 STM4496 STM4497 STM4498 STM4503 STM4534 STM4571