query_id	num_blasthits	nonself_hits	cand_set_num	tophit_id	besthit_id	LPI	pct_id	seq_length	align_len	align_coverage	evalue	bitscore	tax_id	species	lineage	query_annotation	besthit_annotation
gi|1786183|gb|AAC73113.1|	143	135	9	gi|82775384|ref|YP_401730.1|	gi|82775384|ref|YP_401730.1|	0.980850676114783523767512217141749	97	820	820	1	0	1564	300267	Shigella dysenteriae Sd197	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	fused aspartokinase I and homoserine dehydrogenase I [Escherichia coli K12]	aspartokinase I [Shigella dysenteriae Sd197]
gi|81239532|gb|ABB60242.1| aspartokinase I [Shigella dysenteriae Sd197]
gi|1786184|gb|AAC73114.1|	250	203	20	gi|75175995|ref|ZP_00696174.1|	gi|75175995|ref|ZP_00696174.1|	0.980850676114783523767512217141749	95	310	310	1	2e-170	601	344609	Shigella boydii BS512	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	homoserine kinase [Escherichia coli K12]	COG0083: Homoserine kinase [Shigella boydii BS512]
gi|75189112|ref|ZP_00702379.1| COG0083: Homoserine kinase [Escherichia coli E24377A]
gi|75194229|ref|ZP_00704299.1| COG0083: Homoserine kinase [Escherichia coli HS]
gi|75209607|ref|ZP_00709825.1| COG0083: Homoserine kinase [Escherichia coli B171]
gi|75229463|ref|ZP_00716013.1| COG0083: Homoserine kinase [Escherichia coli B7A]
gi|75234566|ref|ZP_00718907.1| COG0083: Homoserine kinase [Escherichia coli E110019]
gi|75256315|ref|ZP_00727987.1| COG0083: Homoserine kinase [Escherichia coli E22]
gi|75515595|ref|ZP_00737752.1| COG0083: Homoserine kinase [Escherichia coli 53638]
gi|82542620|ref|YP_406567.1| homoserine kinase [Shigella boydii Sb227]
gi|82775385|ref|YP_401731.1| homoserine kinase [Shigella dysenteriae Sd197]
gi|91209058|ref|YP_539044.1| homoserine kinase [Escherichia coli UTI89]
gi|81239533|gb|ABB60243.1| homoserine kinase [Shigella dysenteriae Sd197]
gi|81244031|gb|ABB64739.1| homoserine kinase [Shigella boydii Sb227]
gi|91070632|gb|ABE05513.1| homoserine kinase [Escherichia coli UTI89]
gi|1786185|gb|AAC73115.1|	230	208	8	gi|75175994|ref|ZP_00696173.1|	gi|75175994|ref|ZP_00696173.1|	0.980850676114783523767512217141749	96	428	428	1	0	815	344609	Shigella boydii BS512	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	threonine synthase [Escherichia coli K12]	COG0498: Threonine synthase [Shigella boydii BS512]
gi|1786186|gb|AAC73116.1|	10	4	4	gi|82775387|ref|YP_401733.1|	gi|82775387|ref|YP_401733.1|	0.980850676114783523767512217141749	61	98	68	0.69387755102040816326530612244898	3e-15	83	300267	Shigella dysenteriae Sd197	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	predicted protein [Escherichia coli K12]	hypothetical protein SDY_0005 [Shigella dysenteriae Sd197]
gi|81239535|gb|ABB60245.1| conserved hypothetical protein [Shigella dysenteriae Sd197]
gi|1786187|gb|AAC73117.1|	205	198	4	gi|110804079|ref|YP_687599.1|	gi|110804079|ref|YP_687599.1|	0.980850676114783523767512217141749	99	258	258	1	2e-144	514	373384	Shigella flexneri 5 str. 8401	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	conserved protein [Escherichia coli K12]	hypothetical protein SFV_0005 [Shigella flexneri 5 str. 8401]
gi|110613627|gb|ABF02294.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401]
gi|1786188|gb|AAC73118.1|	402	390	1	gi|75175991|ref|ZP_00696170.1|	gi|75175991|ref|ZP_00696170.1|	0.980850676114783523767512217141749	95	476	460	0.966386554621848739495798319327731	0	871	344609	Shigella boydii BS512	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	predicted transporter [Escherichia coli K12]	COG1115: Na+/alanine symporter [Shigella boydii BS512]
gi|1786189|gb|AAC73119.1|	303	289	13	gi|110804080|ref|YP_687600.1|	gi|110804080|ref|YP_687600.1|	0.980850676114783523767512217141749	100	317	317	1	4e-176	620	373384	Shigella flexneri 5 str. 8401	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	transaldolase B [Escherichia coli K12]	transaldolase B [Shigella flexneri 5 str. 8401]
gi|110613628|gb|ABF02295.1| transaldolase B [Shigella flexneri 5 str. 8401]
gi|1786190|gb|AAC73120.1|	317	309	11	gi|110804081|ref|YP_687601.1|	gi|110804081|ref|YP_687601.1|	0.980850676114783523767512217141749	100	195	195	1	1e-105	384	373384	Shigella flexneri 5 str. 8401	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	predicted molybdochelatase [Escherichia coli K12]	predicted molybdochelatase [Shigella flexneri 5 str. 8401]
gi|110613629|gb|ABF02296.1| predicted molybdochelatase [Shigella flexneri 5 str. 8401]
gi|1786191|gb|AAC73121.1|	137	134	4	gi|75175988|ref|ZP_00696167.1|	gi|75175988|ref|ZP_00696167.1|	0.980850676114783523767512217141749	91	188	188	1	6e-94	346	344609	Shigella boydii BS512	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	conserved inner membrane protein associated with acetate transport [Escherichia coli K12]	COG1584: Predicted membrane protein [Shigella boydii BS512]
gi|82542628|ref|YP_406575.1| hypothetical protein SBO_0011 [Shigella boydii Sb227]
gi|81244039|gb|ABB64747.1| conserved hypothetical protein [Shigella boydii Sb227]
gi|1786193|gb|AAC73122.1|	17	8	6	gi|24111461|ref|NP_705971.1|	gi|24111461|ref|NP_705971.1|	0.980850676114783523767512217141749	82	237	237	1	1e-102	375	198214	Shigella flexneri 2a str. 301	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	conserved protein [Escherichia coli K12]	putative oxidoreductase [Shigella flexneri 2a str. 301]
gi|30061581|ref|NP_835752.1| putative oxidoreductase [Shigella flexneri 2a str. 2457T]
gi|24050211|gb|AAN41678.1| putative oxidoreductase [Shigella flexneri 2a str. 301]
gi|30039823|gb|AAP15557.1| putative oxidoreductase [Shigella flexneri 2a str. 2457T]
gi|1786195|gb|AAC73124.1|	11	5	2	gi|24111462|ref|NP_705972.1|	gi|24111462|ref|NP_705972.1|	0.980850676114783523767512217141749	99	134	134	1	9e-70	264	198214	Shigella flexneri 2a str. 301	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	predicted protein [Escherichia coli K12]	hypothetical protein SF0013 [Shigella flexneri 2a str. 301]
gi|30061583|ref|NP_835754.1| hypothetical protein S0013 [Shigella flexneri 2a str. 2457T]
gi|74310626|ref|YP_309045.1| hypothetical protein SSO_0013 [Shigella sonnei Ss046]
gi|83585320|ref|ZP_00923968.1| hypothetical protein Ecol1_01003509 [Escherichia coli 101-1]
gi|110804084|ref|YP_687604.1| hypothetical protein SFV_0011 [Shigella flexneri 5 str. 8401]
gi|24050212|gb|AAN41679.1| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301]
gi|30039825|gb|AAP15559.1| hypothetical protein S_0013 [Shigella flexneri 2a str. 2457T]
gi|73854103|gb|AAZ86810.1| conserved hypothetical protein [Shigella sonnei Ss046]
gi|110613632|gb|ABF02299.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401]
gi|1786196|gb|AAC73125.1|	500	489	13	gi|24111463|ref|NP_705973.1|	gi|24111463|ref|NP_705973.1|	0.980850676114783523767512217141749	97	638	601	0.942006269592476489028213166144201	0	1136	198214	Shigella flexneri 2a str. 301	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	chaperone Hsp70, co-chaperone with DnaJ [Escherichia coli K12]	molecular chaperone DnaK [Shigella flexneri 2a str. 301]
gi|30061584|ref|NP_835755.1| molecular chaperone DnaK [Shigella flexneri 2a str. 2457T]
gi|110804085|ref|YP_687605.1| chaperone Hsp70 [Shigella flexneri 5 str. 8401]
gi|39931098|sp|Q83MH5|DNAK_SHIFL Chaperone protein dnaK (Heat shock protein 70) (Heat shock 70 kDa protein) (HSP70)
gi|24050213|gb|AAN41680.1| chaperone Hsp70; autoregulated heat shock protein [Shigella flexneri 2a str. 301]
gi|30039826|gb|AAP15560.1| chaperone Hsp70; autoregulated heat shock protein [Shigella flexneri 2a str. 2457T]
gi|110613633|gb|ABF02300.1| chaperone Hsp70 [Shigella flexneri 5 str. 8401]
gi|1786197|gb|AAC73126.1|	377	367	6	gi|30061585|ref|NP_835756.1|	gi|30061585|ref|NP_835756.1|	0.980850676114783523767512217141749	76	376	376	1	2e-161	571	198215	Shigella flexneri 2a str. 2457T	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	chaperone Hsp40, co-chaperone with DnaK [Escherichia coli K12]	chaperone with DnaK; heat shock protein [Shigella flexneri 2a str. 2457T]
gi|110804086|ref|YP_687606.1| chaperone with DnaK [Shigella flexneri 5 str. 8401]
gi|30039827|gb|AAP15561.1| chaperone with DnaK; heat shock protein [Shigella flexneri 2a str. 2457T]
gi|110613634|gb|ABF02301.1| chaperone with DnaK [Shigella flexneri 5 str. 8401]
gi|1786198|gb|AAC73127.1|	27	10	1	gi|38348062|ref|NP_941311.1|	gi|38348062|ref|NP_941311.1|	0.920914237219529894247197906831516	99	370	370	1	0	739	615	Serratia marcescens	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Serratia	IS186/IS421 transposase [Escherichia coli K12]	putative transposase for insertion sequence element is186a/b/c [Serratia marcescens]
gi|38259539|emb|CAE51767.1| putative transposase for insertion sequence element is186a/b/c [Serratia marcescens]
gi|1786200|gb|AAC73129.1|	29	9	1	gi|82775397|ref|YP_401743.1|	gi|82775397|ref|YP_401743.1|	0.980850676114783523767512217141749	97	69	69	1	1e-30	134	300267	Shigella dysenteriae Sd197	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	regulatory protein for HokC, overlaps CDS of hokC [Escherichia coli K12]	Gef [Shigella dysenteriae Sd197]
gi|81239545|gb|ABB60255.1| Gef [Shigella dysenteriae Sd197]
gi|1786201|gb|AAC73130.1|	192	184	6	gi|24111465|ref|NP_705975.1|	gi|24111465|ref|NP_705975.1|	0.980850676114783523767512217141749	81	388	388	1	5e-173	610	198214	Shigella flexneri 2a str. 301	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	sodium-proton antiporter [Escherichia coli K12]	Na+/H+ antiporter [Shigella flexneri 2a str. 301]
gi|30061587|ref|NP_835758.1| Na+/H+ antiporter [Shigella flexneri 2a str. 2457T]
gi|24050215|gb|AAN41682.1| Na+/H+ antiporter [Shigella flexneri 2a str. 301]
gi|30039829|gb|AAP15563.1| Na+/H+ antiporter [Shigella flexneri 2a str. 2457T]
gi|1786202|gb|AAC73131.1|	108	100	6	gi|82542636|ref|YP_406583.1|	gi|82542636|ref|YP_406583.1|	0.980850676114783523767512217141749	99	301	301	1	1e-172	608	300268	Shigella boydii Sb227	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	DNA-binding transcriptional activator [Escherichia coli K12]	transcriptional activator of nhaA [Shigella boydii Sb227]
gi|81244047|gb|ABB64755.1| transcriptional activator of nhaA [Shigella boydii Sb227]
gi|1786203|gb|AAC73132.1|	339	287	106	gi|18466540|ref|NP_569348.1|	gi|74312108|ref|YP_310527.1|	0.980850676114783523767512217141749	99	167	167	1	2e-94	346	300269	Shigella sonnei Ss046	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	IS1 transposase InsAB' [Escherichia coli K12]	IS1 ORF [Shigella sonnei Ss046]
gi|74312281|ref|YP_310700.1| IS1 ORF [Shigella sonnei Ss046]
gi|74312306|ref|YP_310725.1| IS1 ORF [Shigella sonnei Ss046]
gi|74312311|ref|YP_310730.1| IS1 ORF [Shigella sonnei Ss046]
gi|74312392|ref|YP_310811.1| IS1 ORF [Shigella sonnei Ss046]
gi|74312459|ref|YP_310878.1| IS1 ORF [Shigella sonnei Ss046]
gi|74312471|ref|YP_310890.1| IS1 ORF [Shigella sonnei Ss046]
gi|74312522|ref|YP_310941.1| IS1 ORF [Shigella sonnei Ss046]
gi|74312792|ref|YP_311211.1| IS1 ORF [Shigella sonnei Ss046]
gi|74312822|ref|YP_311241.1| IS1 ORF [Shigella sonnei Ss046]
gi|74312861|ref|YP_311280.1| IS1 ORF [Shigella sonnei Ss046]
gi|73855585|gb|AAZ88292.1| IS1 ORF [Shigella sonnei Ss046]
gi|73855758|gb|AAZ88465.1| IS1 ORF [Shigella sonnei Ss046]
gi|73855783|gb|AAZ88490.1| IS1 ORF [Shigella sonnei Ss046]
gi|73855788|gb|AAZ88495.1| IS1 ORF [Shigella sonnei Ss046]
gi|73855869|gb|AAZ88576.1| IS1 ORF [Shigella sonnei Ss046]
gi|73855936|gb|AAZ88643.1| IS1 ORF [Shigella sonnei Ss046]
gi|73855948|gb|AAZ88655.1| IS1 ORF [Shigella sonnei Ss046]
gi|73855999|gb|AAZ88706.1| IS1 ORF [Shigella sonnei Ss046]
gi|73856269|gb|AAZ88976.1| IS1 ORF [Shigella sonnei Ss046]
gi|73856299|gb|AAZ89006.1| IS1 ORF [Shigella sonnei Ss046]
gi|73856338|gb|AAZ89045.1| IS1 ORF [Shigella sonnei Ss046]
gi|1786204|gb|AAC73133.1|	124	96	45	gi|10957284|ref|NP_058308.1|	gi|50262985|gb|AAT72887.1|	0.980850676114783523767512217141749	98	91	91	1	1e-47	191	624	Shigella sonnei	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	IS1 repressor protein InsA [Escherichia coli K12]	InsA [Shigella sonnei]
gi|1786206|gb|AAC73134.1|	309	299	4	gi|16759037|ref|NP_454654.1|	gi|110804091|ref|YP_687611.1|	0.980850676114783523767512217141749	97	87	87	1	1e-38	161	373384	Shigella flexneri 5 str. 8401	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	30S ribosomal subunit protein S20 [Escherichia coli K12]	30S ribosomal subunit protein S20 [Shigella flexneri 5 str. 8401]
gi|110613639|gb|ABF02306.1| 30S ribosomal subunit protein S20 [Shigella flexneri 5 str. 8401]
gi|1786207|gb|AAC73135.1|	8	4	2	gi|30061592|ref|NP_835763.1|	gi|30061592|ref|NP_835763.1|	0.980850676114783523767512217141749	98	72	72	1	6e-34	145	198215	Shigella flexneri 2a str. 2457T	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	predicted protein [Escherichia coli K12]	hypothetical protein S0023 [Shigella flexneri 2a str. 2457T]
gi|30039834|gb|AAP15568.1| hypothetical protein S_0023 [Shigella flexneri 2a str. 2457T]
gi|1786208|gb|AAC73136.1|	427	419	2	gi|82542641|ref|YP_406588.1|	gi|82542641|ref|YP_406588.1|	0.980850676114783523767512217141749	99	313	313	1	4e-175	617	300268	Shigella boydii Sb227	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	bifunctional riboflavin kinase/FAD synthetase [Escherichia coli K12]	putative regulator [Shigella boydii Sb227]
gi|81244052|gb|ABB64760.1| putative regulator [Shigella boydii Sb227]
gi|1786210|gb|AAC73138.1|	378	370	8	gi|24111472|ref|NP_705982.1|	gi|24111472|ref|NP_705982.1|	0.980850676114783523767512217141749	92	164	164	1	6e-82	305	198214	Shigella flexneri 2a str. 301	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	prolipoprotein signal peptidase (signal peptidase II) [Escherichia coli K12]	signal peptidase II [Shigella flexneri 2a str. 301]
gi|30061595|ref|NP_835766.1| signal peptidase II [Shigella flexneri 2a str. 2457T]
gi|24050222|gb|AAN41689.1| prolipoprotein signal peptidase (SPase II) [Shigella flexneri 2a str. 301]
gi|30039837|gb|AAP15571.1| prolipoprotein signal peptidase (SPase II) [Shigella flexneri 2a str. 2457T]
gi|1786211|gb|AAC73139.1|	346	337	3	gi|82775430|ref|YP_401777.1|	gi|82775430|ref|YP_401777.1|	0.980850676114783523767512217141749	97	149	149	1	5e-77	288	300267	Shigella dysenteriae Sd197	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase) [Escherichia coli K12]	probable FKBX-type 16KD peptidyl-prolyl cis-trans isomerase [Shigella dysenteriae Sd197]
gi|81239578|gb|ABB60288.1| probable FKBX-type 16KD peptidyl-prolyl cis-trans isomerase [Shigella dysenteriae Sd197]
gi|1786212|gb|AAC73140.1|	334	327	5	gi|30061597|ref|NP_835768.1|	gi|30061597|ref|NP_835768.1|	0.980850676114783523767512217141749	93	316	316	1	2e-164	581	198215	Shigella flexneri 2a str. 2457T	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate reductase, 4Fe-4S protein [Escherichia coli K12]	4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Shigella flexneri 2a str. 2457T]
gi|56479587|ref|NP_705985.2| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Shigella flexneri 2a str. 301]
gi|110804096|ref|YP_687616.1| penicillin tolerance protein [Shigella flexneri 5 str. 8401]
gi|50400952|sp|Q7UDT8|ISPH_SHIFL 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|30039839|gb|AAP15573.1| LytB protein [Shigella flexneri 2a str. 2457T]
gi|56383138|gb|AAN41692.2| LytB protein [Shigella flexneri 2a str. 301]
gi|110613644|gb|ABF02311.1| penicillin tolerance protein [Shigella flexneri 5 str. 8401]
gi|1786213|gb|AAC73141.1|	291	263	5	gi|74310648|ref|YP_309067.1|	gi|74310648|ref|YP_309067.1|	0.980850676114783523767512217141749	94	304	304	1	1e-163	578	300269	Shigella sonnei Ss046	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	ribonucleoside hydrolase 3 [Escherichia coli K12]	hypothetical protein SSO_0035 [Shigella sonnei Ss046]
gi|85541762|sp|Q3Z5Y0|RIHC_SHISS Nonspecific ribonucleoside hydrolase rihC (Purine/pyrimidine ribonucleoside hydrolase)
gi|73854125|gb|AAZ86832.1| conserved hypothetical protein [Shigella sonnei Ss046]
gi|1786214|gb|AAC73142.1|	364	358	10	gi|24111477|ref|NP_705987.1|	gi|24111477|ref|NP_705987.1|	0.980850676114783523767512217141749	94	273	273	1	5e-142	506	198214	Shigella flexneri 2a str. 301	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	dihydrodipicolinate reductase [Escherichia coli K12]	dihydrodipicolinate reductase [Shigella flexneri 2a str. 301]
gi|26245952|ref|NP_751991.1| dihydrodipicolinate reductase [Escherichia coli CFT073]
gi|30061599|ref|NP_835770.1| dihydrodipicolinate reductase [Shigella flexneri 2a str. 2457T]
gi|75237176|ref|ZP_00721224.1| COG0289: Dihydrodipicolinate reductase [Escherichia coli F11]
gi|91209089|ref|YP_539075.1| dihydrodipicolinate reductase [Escherichia coli UTI89]
gi|110640242|ref|YP_667970.1| dihydrodipicolinate reductase [Escherichia coli 536]
gi|34222582|sp|Q8FLB4|DAPB_ECOL6 Dihydrodipicolinate reductase (DHPR)
gi|39931104|sp|Q83SQ9|DAPB_SHIFL Dihydrodipicolinate reductase (DHPR)
gi|26106349|gb|AAN78535.1|AE016755_35 Dihydrodipicolinate reductase [Escherichia coli CFT073]
gi|24050228|gb|AAN41694.1| dihydrodipicolinate reductase [Shigella flexneri 2a str. 301]
gi|30039841|gb|AAP15575.1| dihydrodipicolinate reductase [Shigella flexneri 2a str. 2457T]
gi|91070663|gb|ABE05544.1| dihydrodipicolinate reductase [Escherichia coli UTI89]
gi|110341834|gb|ABG68071.1| dihydrodipicolinate reductase [Escherichia coli 536]
gi|1786215|gb|AAC73143.1|	344	331	9	gi|75175963|ref|ZP_00696142.1|	gi|75175963|ref|ZP_00696142.1|	0.980850676114783523767512217141749	99	382	382	1	0	770	344609	Shigella boydii BS512	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	carbamoyl phosphate synthetase small subunit, glutamine amidotransferase [Escherichia coli K12]	COG0505: Carbamoylphosphate synthase small subunit [Shigella boydii BS512]
gi|75189136|ref|ZP_00702403.1| COG0505: Carbamoylphosphate synthase small subunit [Escherichia coli E24377A]
gi|75194253|ref|ZP_00704323.1| COG0505: Carbamoylphosphate synthase small subunit [Escherichia coli HS]
gi|75208888|ref|ZP_00709165.1| COG0505: Carbamoylphosphate synthase small subunit [Escherichia coli B171]
gi|75227862|ref|ZP_00714572.1| COG0505: Carbamoylphosphate synthase small subunit [Escherichia coli B7A]
gi|75234157|ref|ZP_00718561.1| COG0505: Carbamoylphosphate synthase small subunit [Escherichia coli E110019]
gi|75255687|ref|ZP_00727453.1| COG0505: Carbamoylphosphate synthase small subunit [Escherichia coli E22]
gi|75515620|ref|ZP_00737777.1| COG0505: Carbamoylphosphate synthase small subunit [Escherichia coli 53638]
gi|83584924|ref|ZP_00923581.1| COG0505: Carbamoylphosphate synthase small subunit [Escherichia coli 101-1]
gi|1786216|gb|AAC73144.1|	397	387	17	gi|74310651|ref|YP_309070.1|	gi|74310651|ref|YP_309070.1|	0.980850676114783523767512217141749	99	1073	1073	1	0	2101	300269	Shigella sonnei Ss046	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	carbamoyl-phosphate synthase large subunit [Escherichia coli K12]	carbamoyl-phosphate synthase large subunit [Shigella sonnei Ss046]
gi|75189137|ref|ZP_00702404.1| COG0458: Carbamoylphosphate synthase large subunit (split gene in MJ) [Escherichia coli E24377A]
gi|75194254|ref|ZP_00704324.1| COG0458: Carbamoylphosphate synthase large subunit (split gene in MJ) [Escherichia coli HS]
gi|75208889|ref|ZP_00709166.1| COG0458: Carbamoylphosphate synthase large subunit (split gene in MJ) [Escherichia coli B171]
gi|75227863|ref|ZP_00714573.1| COG0458: Carbamoylphosphate synthase large subunit (split gene in MJ) [Escherichia coli B7A]
gi|75234156|ref|ZP_00718560.1| COG0458: Carbamoylphosphate synthase large subunit (split gene in MJ) [Escherichia coli E110019]
gi|75255688|ref|ZP_00727454.1| COG0458: Carbamoylphosphate synthase large subunit (split gene in MJ) [Escherichia coli E22]
gi|82542649|ref|YP_406596.1| carbamoyl-phosphate synthase large subunit [Shigella boydii Sb227]
gi|83584923|ref|ZP_00923580.1| COG0458: Carbamoylphosphate synthase large subunit (split gene in MJ) [Escherichia coli 101-1]
gi|73854128|gb|AAZ86835.1| carbamoyl-phosphate synthase large subunit [Shigella sonnei Ss046]
gi|81244060|gb|ABB64768.1| carbamoyl-phosphate synthase large subunit [Shigella boydii Sb227]
gi|1786220|gb|AAC73147.1|	496	480	3	gi|24111482|ref|NP_705992.1|	gi|24111482|ref|NP_705992.1|	0.980850676114783523767512217141749	94	297	297	1	3e-156	554	198214	Shigella flexneri 2a str. 301	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	crotonobetainyl CoA hydratase [Escherichia coli K12]	carnitinyl-CoA dehydratase [Shigella flexneri 2a str. 301]
gi|30061604|ref|NP_835775.1| carnitinyl-CoA dehydratase [Shigella flexneri 2a str. 2457T]
gi|110804103|ref|YP_687623.1| carnitine racemase [Shigella flexneri 5 str. 8401]
gi|24050233|gb|AAN41699.1| carnitine racemase [Shigella flexneri 2a str. 301]
gi|30039846|gb|AAP15580.1| carnitine racemase [Shigella flexneri 2a str. 2457T]
gi|110613651|gb|ABF02318.1| carnitine racemase [Shigella flexneri 5 str. 8401]
gi|1786221|gb|AAC73148.1|	361	345	4	gi|74310656|ref|YP_309075.1|	gi|74310656|ref|YP_309075.1|	0.980850676114783523767512217141749	96	522	522	1	0	1034	300269	Shigella sonnei Ss046	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	predicted crotonobetaine CoA ligase:carnitine CoA ligase [Escherichia coli K12]	probable crotonobetaine/carnitine-CoA ligase [Shigella sonnei Ss046]
gi|73854133|gb|AAZ86840.1| probable crotonobetaine/carnitine-CoA ligase [Shigella sonnei Ss046]
gi|1786222|gb|AAC73149.1|	236	217	6	gi|24111484|ref|NP_705994.1|	gi|24111484|ref|NP_705994.1|	0.980850676114783523767512217141749	97	405	405	1	0	815	198214	Shigella flexneri 2a str. 301	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	crotonobetainyl CoA:carnitine CoA transferase [Escherichia coli K12]	crotonobetainyl-CoA:carnitineCoA-transferase [Shigella flexneri 2a str. 301]
gi|30061606|ref|NP_835777.1| crotonobetainyl-CoA:carnitineCoA-transferase [Shigella flexneri 2a str. 2457T]
gi|29336604|sp|P59394|CAIB_SHIFL Crotonobetainyl-CoA:carnitine CoA-transferase
gi|24050235|gb|AAN41701.1| l-carnitine dehydratase [Shigella flexneri 2a str. 301]
gi|30039848|gb|AAP15582.1| l-carnitine dehydratase [Shigella flexneri 2a str. 2457T]
gi|1786223|gb|AAC73150.1|	499	488	4	gi|110804106|ref|YP_687626.1|	gi|110804106|ref|YP_687626.1|	0.980850676114783523767512217141749	99	380	380	1	0	771	373384	Shigella flexneri 5 str. 8401	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	crotonobetaine reductase subunit II, FAD-binding [Escherichia coli K12]	probable carnitine operon oxidoreductase [Shigella flexneri 5 str. 8401]
gi|110613654|gb|ABF02321.1| probable carnitine operon oxidoreductase [Shigella flexneri 5 str. 8401]
gi|1786224|gb|AAC73151.1|	363	332	7	gi|24111486|ref|NP_705996.1|	gi|24111486|ref|NP_705996.1|	0.980850676114783523767512217141749	95	504	504	1	0	990	198214	Shigella flexneri 2a str. 301	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	predicted transporter [Escherichia coli K12]	L-carnitine/gamma-butyrobetaine antiporter [Shigella flexneri 2a str. 301]
gi|30061608|ref|NP_835779.1| L-carnitine/gamma-butyrobetaine antiporter [Shigella flexneri 2a str. 2457T]
gi|28558061|sp|P59335|CAIT_SHIFL L-carnitine/gamma-butyrobetaine antiporter
gi|24050238|gb|AAN41703.1| probable carnitine transporter [Shigella flexneri 2a str. 301]
gi|30039850|gb|AAP15584.1| probable carnitine transporter [Shigella flexneri 2a str. 2457T]
gi|1786226|gb|AAC73153.1|	382	363	1	gi|82775444|ref|YP_401791.1|	gi|82775444|ref|YP_401791.1|	0.980850676114783523767512217141749	99	313	313	1	5e-174	613	300267	Shigella dysenteriae Sd197	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	predicted electron transfer flavoprotein, NAD/FAD-binding domain and ETFP adenine nucleotide-binding domain-like [Escherichia coli K12]	FixB [Shigella dysenteriae Sd197]
gi|81239592|gb|ABB60302.1| FixB [Shigella dysenteriae Sd197]
gi|1786227|gb|AAC73154.1|	124	97	5	gi|74310663|ref|YP_309082.1|	gi|74310663|ref|YP_309082.1|	0.980850676114783523767512217141749	95	428	428	1	0	802	300269	Shigella sonnei Ss046	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	predicted oxidoreductase with FAD/NAD(P)-binding domain [Escherichia coli K12]	flavoprotein [Shigella sonnei Ss046]
gi|75515631|ref|ZP_00737788.1| COG0644: Dehydrogenases (flavoproteins) [Escherichia coli 53638]
gi|73854140|gb|AAZ86847.1| flavoprotein [Shigella sonnei Ss046]
gi|1786228|gb|AAC73155.1|	78	62	4	gi|24111490|ref|NP_706000.1|	gi|24111490|ref|NP_706000.1|	0.980850676114783523767512217141749	98	95	95	1	1e-50	200	198214	Shigella flexneri 2a str. 301	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	predicted 4Fe-4S ferredoxin-type protein [Escherichia coli K12]	putative ferredoxin [Shigella flexneri 2a str. 301]
gi|30061611|ref|NP_835782.1| putative ferredoxin [Shigella flexneri 2a str. 2457T]
gi|75189148|ref|ZP_00702415.1| COG2440: Ferredoxin-like protein [Escherichia coli E24377A]
gi|75234145|ref|ZP_00718549.1| COG2440: Ferredoxin-like protein [Escherichia coli E110019]
gi|110804110|ref|YP_687630.1| putative ferredoxin [Shigella flexneri 5 str. 8401]
gi|56404595|sp|Q83SQ6|FIXX_SHIFL Ferredoxin-like protein fixX
gi|24050242|gb|AAN41707.1| putative ferredoxin [Shigella flexneri 2a str. 301]
gi|30039853|gb|AAP15587.1| putative ferredoxin [Shigella flexneri 2a str. 2457T]
gi|110613658|gb|ABF02325.1| putative ferredoxin [Shigella flexneri 5 str. 8401]
gi|1786229|gb|AAC73156.1|	144	125	1	gi|24111491|ref|NP_706001.1|	gi|24111491|ref|NP_706001.1|	0.980850676114783523767512217141749	97	443	443	1	0	857	198214	Shigella flexneri 2a str. 301	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	predicted transporter [Escherichia coli K12]	putative transport protein [Shigella flexneri 2a str. 301]
gi|30061612|ref|NP_835783.1| putative transport protein [Shigella flexneri 2a str. 2457T]
gi|110804111|ref|YP_687631.1| putative transport protein [Shigella flexneri 5 str. 8401]
gi|24050243|gb|AAN41708.1| putative transport protein [Shigella flexneri 2a str. 301]
gi|30039854|gb|AAP15588.1| putative transport protein [Shigella flexneri 2a str. 2457T]
gi|110613659|gb|ABF02326.1| putative transport protein [Shigella flexneri 5 str. 8401]
gi|1786231|gb|AAC73157.1|	144	129	6	gi|24111492|ref|NP_706002.1|	gi|24111492|ref|NP_706002.1|	0.980850676114783523767512217141749	99	176	176	1	6e-105	382	198214	Shigella flexneri 2a str. 301	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	flavoprotein subunit for the KefC potassium efflux system [Escherichia coli K12]	glutathione-regulated potassium-efflux system ancillary protein [Shigella flexneri 2a str. 301]
gi|30061613|ref|NP_835784.1| glutathione-regulated potassium-efflux system ancillary protein [Shigella flexneri 2a str. 2457T]
gi|110804112|ref|YP_687632.1| putative NAD(P)H oxidoreductase [Shigella flexneri 5 str. 8401]
gi|37537880|sp|Q83SQ4|KEFF_SHIFL Glutathione-regulated potassium-efflux system ancillary protein kefF
gi|24050244|gb|AAN41709.1| putative NAD(P)H oxidoreductase [Shigella flexneri 2a str. 301]
gi|30039855|gb|AAP15589.1| putative NAD(P)H oxidoreductase [Shigella flexneri 2a str. 2457T]
gi|110613660|gb|ABF02327.1| putative NAD(P)H oxidoreductase [Shigella flexneri 5 str. 8401]
gi|1786232|gb|AAC73158.1|	217	198	8	gi|75175957|ref|ZP_00696136.1|	gi|75175957|ref|ZP_00696136.1|	0.980850676114783523767512217141749	87	620	620	1	0	1021	344609	Shigella boydii BS512	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	potassium:proton antiporter [Escherichia coli K12]	COG0475: Kef-type K+ transport systems, membrane components [Shigella boydii BS512]
gi|75194268|ref|ZP_00704338.1| COG0475: Kef-type K+ transport systems, membrane components [Escherichia coli HS]
gi|82542653|ref|YP_406600.1| K+ efflux antiporter [Shigella boydii Sb227]
gi|83584908|ref|ZP_00923565.1| COG0475: Kef-type K+ transport systems, membrane components [Escherichia coli 101-1]
gi|81244064|gb|ABB64772.1| K+ efflux antiporter [Shigella boydii Sb227]
gi|1786233|gb|AAC73159.1|	396	367	7	gi|16759082|ref|NP_454699.1|	gi|82775451|ref|YP_401798.1|	0.980850676114783523767512217141749	98	159	159	1	2e-88	327	300267	Shigella dysenteriae Sd197	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	dihydrofolate reductase [Escherichia coli K12]	dihydrofolate reductase type I [Shigella dysenteriae Sd197]
gi|81239599|gb|ABB60309.1| dihydrofolate reductase type I [Shigella dysenteriae Sd197]
gi|1786234|gb|AAC73160.1|	174	165	6	gi|24111495|ref|NP_706005.1|	gi|24111495|ref|NP_706005.1|	0.980850676114783523767512217141749	99	280	280	1	4e-166	586	198214	Shigella flexneri 2a str. 301	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	diadenosine tetraphosphatase [Escherichia coli K12]	diadenosinetetraphosphatase [Shigella flexneri 2a str. 301]
gi|30061616|ref|NP_835787.1| diadenosinetetraphosphatase [Shigella flexneri 2a str. 2457T]
gi|75189153|ref|ZP_00702420.1| COG0639: Diadenosine tetraphosphatase and related serine/threonine protein phosphatases [Escherichia coli E24377A]
gi|75194270|ref|ZP_00704340.1| COG0639: Diadenosine tetraphosphatase and related serine/threonine protein phosphatases [Escherichia coli HS]
gi|75208905|ref|ZP_00709182.1| COG0639: Diadenosine tetraphosphatase and related serine/threonine protein phosphatases [Escherichia coli B171]
gi|75255704|ref|ZP_00727470.1| COG0639: Diadenosine tetraphosphatase and related serine/threonine protein phosphatases [Escherichia coli E22]
gi|110804115|ref|YP_687635.1| diadenosine tetraphosphatase [Shigella flexneri 5 str. 8401]
gi|60389770|sp|Q83SQ2|APAH_SHIFL Bis(5'-nucleosyl)-tetraphosphatase, symmetrical (Diadenosine tetraphosphatase) (Ap4A hydrolase) (Diadenosine 5',5'''-P1,P4-tetraphosphate pyrophosphohydrolase)
gi|24050248|gb|AAN41712.1| diadenosine tetraphosphatase [Shigella flexneri 2a str. 301]
gi|30039858|gb|AAP15592.1| diadenosine tetraphosphatase [Shigella flexneri 2a str. 2457T]
gi|110613663|gb|ABF02330.1| diadenosine tetraphosphatase [Shigella flexneri 5 str. 8401]
gi|1786235|gb|AAC73161.1|	155	152	3	gi|1003021|gb|AAA79339.1|	gi|1003021|gb|AAA79339.1|	0.924894897038167149339529796771127	86	125	125	1	7e-56	218	602	Salmonella typhimurium	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella	protein associated with Co2+ and Mg2+ efflux [Escherichia coli K12]	CorD
gi|1786236|gb|AAC73162.1|	472	462	13	gi|75175953|ref|ZP_00696132.1|	gi|75175953|ref|ZP_00696132.1|	0.980850676114783523767512217141749	99	273	273	1	1e-153	545	344609	Shigella boydii BS512	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase [Escherichia coli K12]	COG0030: Dimethyladenosine transferase (rRNA methylation) [Shigella boydii BS512]
gi|1786237|gb|AAC73163.1|	382	371	9	gi|74310671|ref|YP_309090.1|	gi|74310671|ref|YP_309090.1|	0.980850676114783523767512217141749	98	329	329	1	0	647	300269	Shigella sonnei Ss046	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	4-hydroxy-L-threonine phosphate dehydrogenase, NAD-dependent [Escherichia coli K12]	pyridoxine biosynthesis [Shigella sonnei Ss046]
gi|73854148|gb|AAZ86855.1| pyridoxine biosynthesis [Shigella sonnei Ss046]
gi|1786238|gb|AAC73164.1|	160	156	4	gi|82775458|ref|YP_401805.1|	gi|82775458|ref|YP_401805.1|	0.980850676114783523767512217141749	99	428	428	1	0	830	300267	Shigella dysenteriae Sd197	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	peptidyl-prolyl cis-trans isomerase (PPIase) [Escherichia coli K12]	survival protein [Shigella dysenteriae Sd197]
gi|81239606|gb|ABB60316.1| survival protein [Shigella dysenteriae Sd197]
gi|1786239|gb|AAC73165.1|	119	111	8	gi|74310673|ref|YP_309092.1|	gi|74310673|ref|YP_309092.1|	0.980850676114783523767512217141749	99	784	784	1	0	1627	300269	Shigella sonnei Ss046	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	exported protein required for envelope biosynthesis and integrity [Escherichia coli K12]	organic solvent tolerance [Shigella sonnei Ss046]
gi|82542660|ref|YP_406607.1| organic solvent tolerance [Shigella boydii Sb227]
gi|73854150|gb|AAZ86857.1| organic solvent tolerance [Shigella sonnei Ss046]
gi|81244071|gb|ABB64779.1| organic solvent tolerance [Shigella boydii Sb227]
gi|1786241|gb|AAC73166.1|	71	59	3	gi|75175615|ref|ZP_00695823.1|	gi|75175615|ref|ZP_00695823.1|	0.980850676114783523767512217141749	84	271	271	1	7e-123	443	344609	Shigella boydii BS512	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	DnaJ-like protein, membrane anchored [Escherichia coli K12]	COG1076: DnaJ-domain-containing proteins 1 [Shigella boydii BS512]
gi|1786242|gb|AAC73167.1|	4	1	1	gi|82775461|ref|YP_401808.1|	gi|82775461|ref|YP_401808.1|	0.980850676114783523767512217141749	86	216	192	0.888888888888888888888888888888889	2e-96	354	300267	Shigella dysenteriae Sd197	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	predicted protein [Escherichia coli K12]	hypothetical protein SDY_0081 [Shigella dysenteriae Sd197]
gi|81239609|gb|ABB60319.1| conserved hypothetical protein [Shigella dysenteriae Sd197]
gi|1786244|gb|AAC73169.1|	405	397	5	gi|75175616|ref|ZP_00695824.1|	gi|75175616|ref|ZP_00695824.1|	0.980850676114783523767512217141749	99	219	219	1	5e-125	449	344609	Shigella boydii BS512	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	pseudouridine synthase for 23S rRNA (position 746) and tRNAphe(position 32) [Escherichia coli K12]	COG0564: Pseudouridylate synthases, 23S RNA-specific [Shigella boydii BS512]
gi|1786245|gb|AAC73170.1|	94	87	10	gi|24111503|ref|NP_706013.1|	gi|24111503|ref|NP_706013.1|	0.980850676114783523767512217141749	99	968	968	1	0	1918	198214	Shigella flexneri 2a str. 301	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	RNA polymerase-associated helicase protein (ATPase and RNA polymerase recycling factor) [Escherichia coli K12]	ATP-dependent helicase HepA [Shigella flexneri 2a str. 301]
gi|110804123|ref|YP_687643.1| probable ATP-dependent RNA helicase [Shigella flexneri 5 str. 8401]
gi|41017652|sp|Q7UDT5|RAPA_SHIFL RNA polymerase-associated protein rapA (ATP-dependent helicase hepA)
gi|24050256|gb|AAN41720.1| probable ATP-dependent RNA helicase [Shigella flexneri 2a str. 301]
gi|110613671|gb|ABF02338.1| probable ATP-dependent RNA helicase [Shigella flexneri 5 str. 8401]
gi|1786246|gb|AAC73171.1|	99	83	9	gi|75175618|ref|ZP_00695826.1|	gi|75175618|ref|ZP_00695826.1|	0.980850676114783523767512217141749	99	783	783	1	0	1613	344609	Shigella boydii BS512	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	DNA polymerase II [Escherichia coli K12]	COG0417: DNA polymerase elongation subunit (family B) [Shigella boydii BS512]
gi|1786247|gb|AAC73172.1|	147	118	7	gi|74310678|ref|YP_309097.1|	gi|74310678|ref|YP_309097.1|	0.980850676114783523767512217141749	99	231	231	1	1e-132	475	300269	Shigella sonnei Ss046	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	L-ribulose-5-phosphate 4-epimerase [Escherichia coli K12]	L-ribulose-5-phosphate 4-epimerase [Shigella sonnei Ss046]
gi|73854155|gb|AAZ86862.1| L-ribulose-5-phosphate 4-epimerase [Shigella sonnei Ss046]
gi|1786248|gb|AAC73173.1|	79	73	10	gi|74310679|ref|YP_309098.1|	gi|74310679|ref|YP_309098.1|	0.980850676114783523767512217141749	99	500	500	1	0	1029	300269	Shigella sonnei Ss046	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	L-arabinose isomerase [Escherichia coli K12]	L-arabinose isomerase [Shigella sonnei Ss046]
gi|75189164|ref|ZP_00702431.1| COG2160: L-arabinose isomerase [Escherichia coli E24377A]
gi|75194281|ref|ZP_00704351.1| COG2160: L-arabinose isomerase [Escherichia coli HS]
gi|75229087|ref|ZP_00715667.1| COG2160: L-arabinose isomerase [Escherichia coli B7A]
gi|75234301|ref|ZP_00718679.1| COG2160: L-arabinose isomerase [Escherichia coli E110019]
gi|75236941|ref|ZP_00721000.1| COG2160: L-arabinose isomerase [Escherichia coli F11]
gi|75511714|ref|ZP_00734352.1| COG2160: L-arabinose isomerase [Escherichia coli 53638]
gi|82542666|ref|YP_406613.1| L-arabinose isomerase [Shigella boydii Sb227]
gi|83585214|ref|ZP_00923864.1| COG2160: L-arabinose isomerase [Escherichia coli 101-1]
gi|91209122|ref|YP_539108.1| L-arabinose isomerase [Escherichia coli UTI89]
gi|110640274|ref|YP_668002.1| L-arabinose isomerase [Escherichia coli 536]
gi|73854156|gb|AAZ86863.1| L-arabinose isomerase [Shigella sonnei Ss046]
gi|81244077|gb|ABB64785.1| L-arabinose isomerase [Shigella boydii Sb227]
gi|91070696|gb|ABE05577.1| L-arabinose isomerase [Escherichia coli UTI89]
gi|110341866|gb|ABG68103.1| L-arabinose isomerase [Escherichia coli 536]
gi|225432|prf||1303258B operon araA
gi|1786249|gb|AAC73174.1|	66	55	9	gi|24111506|ref|NP_706016.1|	gi|24111506|ref|NP_706016.1|	0.980850676114783523767512217141749	94	566	566	1	0	1095	198214	Shigella flexneri 2a str. 301	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	L-ribulokinase [Escherichia coli K12]	ribulokinase [Shigella flexneri 2a str. 301]
gi|30061628|ref|NP_835799.1| ribulokinase [Shigella flexneri 2a str. 2457T]
gi|60389769|sp|Q83MG5|ARAB_SHIFL Ribulokinase
gi|24050261|gb|AAN41723.1| L-ribulokinase [Shigella flexneri 2a str. 301]
gi|30039870|gb|AAP15604.1| L-ribulokinase [Shigella flexneri 2a str. 2457T]
gi|1786251|gb|AAC73175.1|	36	27	6	gi|74310681|ref|YP_309100.1|	gi|74310681|ref|YP_309100.1|	0.980850676114783523767512217141749	95	292	292	1	4e-165	583	300269	Shigella sonnei Ss046	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	DNA-binding transcriptional dual regulator [Escherichia coli K12]	transcriptional regulator for ara operon [Shigella sonnei Ss046]
gi|73854158|gb|AAZ86865.1| transcriptional regulator for ara operon [Shigella sonnei Ss046]
gi|1786252|gb|AAC73176.1|	123	111	6	gi|24111508|ref|NP_706018.1|	gi|24111508|ref|NP_706018.1|	0.980850676114783523767512217141749	99	254	254	1	8e-147	522	198214	Shigella flexneri 2a str. 301	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	conserved inner membrane protein [Escherichia coli K12]	hypothetical protein SF0060 [Shigella flexneri 2a str. 301]
gi|30061630|ref|NP_835801.1| hypothetical protein S0062 [Shigella flexneri 2a str. 2457T]
gi|75194284|ref|ZP_00704354.1| COG0586: Uncharacterized membrane-associated protein [Escherichia coli HS]
gi|82542669|ref|YP_406616.1| hypothetical protein SBO_0052 [Shigella boydii Sb227]
gi|110804129|ref|YP_687649.1| hypothetical protein SFV_0057 [Shigella flexneri 5 str. 8401]
gi|24050263|gb|AAN41725.1| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301]
gi|30039872|gb|AAP15606.1| hypothetical protein S_0062 [Shigella flexneri 2a str. 2457T]
gi|81244080|gb|ABB64788.1| conserved hypothetical protein [Shigella boydii Sb227]
gi|110613677|gb|ABF02344.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401]
gi|1786253|gb|AAC73177.1|	499	475	6	gi|30061631|ref|NP_835802.1|	gi|30061631|ref|NP_835802.1|	0.980850676114783523767512217141749	92	232	232	1	4e-115	416	198215	Shigella flexneri 2a str. 2457T	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	thiamin transporter subunit [Escherichia coli K12]	putative ATP-binding component of a transport system [Shigella flexneri 2a str. 2457T]
gi|30039873|gb|AAP15607.1| putative ATP-binding component of a transport system [Shigella flexneri 2a str. 2457T]
gi|1786254|gb|AAC73178.1|	88	76	9	gi|24111510|ref|NP_706020.1|	gi|24111510|ref|NP_706020.1|	0.980850676114783523767512217141749	88	536	536	1	0	941	198214	Shigella flexneri 2a str. 301	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	fused thiamin transporter subunits of ABC superfamily: membrane components [Escherichia coli K12]	thiamin ABC transporter membrane component [Shigella flexneri 2a str. 301]
gi|30061632|ref|NP_835803.1| thiamin ABC transporter membrane component [Shigella flexneri 2a str. 2457T]
gi|75209411|ref|ZP_00709643.1| COG1178: ABC-type Fe3+ transport system, permease component [Escherichia coli B171]
gi|24050265|gb|AAN41727.1| putative transport system permease protein [Shigella flexneri 2a str. 301]
gi|30039874|gb|AAP15608.1| putative transport system permease protein [Shigella flexneri 2a str. 2457T]
gi|1786255|gb|AAC73179.1|	107	96	8	gi|82775473|ref|YP_401820.1|	gi|82775473|ref|YP_401820.1|	0.980850676114783523767512217141749	94	327	315	0.963302752293577981651376146788991	8e-173	609	300267	Shigella dysenteriae Sd197	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	thiamin transporter subunit [Escherichia coli K12]	thiamin-binding periplasmic protein [Shigella dysenteriae Sd197]
gi|81239621|gb|ABB60331.1| thiamin-binding periplasmic protein [Shigella dysenteriae Sd197]
gi|1786256|gb|AAC73180.1|	73	55	4	gi|74310686|ref|YP_309105.1|	gi|74310686|ref|YP_309105.1|	0.980850676114783523767512217141749	98	551	551	1	0	1135	300269	Shigella sonnei Ss046	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	DNA-binding transcriptional regulator [Escherichia coli K12]	putative transport protein [Shigella sonnei Ss046]
gi|75175627|ref|ZP_00695835.1| COG4533: ABC-type uncharacterized transport system, periplasmic component [Shigella boydii BS512]
gi|75229080|ref|ZP_00715660.1| COG4533: ABC-type uncharacterized transport system, periplasmic component [Escherichia coli B7A]
gi|73854163|gb|AAZ86870.1| putative transport protein [Shigella sonnei Ss046]
gi|1786258|gb|AAC73182.1|	484	479	5	gi|24111514|ref|NP_706024.1|	gi|24111514|ref|NP_706024.1|	0.980850676114783523767512217141749	99	201	201	1	6e-114	412	198214	Shigella flexneri 2a str. 301	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	3-isopropylmalate isomerase subunit [Escherichia coli K12]	isopropylmalate isomerase small subunit [Shigella flexneri 2a str. 301]
gi|30061636|ref|NP_835807.1| isopropylmalate isomerase small subunit [Shigella flexneri 2a str. 2457T]
gi|110804134|ref|YP_687654.1| isopropylmalate isomerase subunit [Shigella flexneri 5 str. 8401]
gi|32129698|sp|P59714|LEUD_SHIFL 3-isopropylmalate dehydratase small subunit (Isopropylmalate isomerase) (Alpha-IPM isomerase) (IPMI)
gi|24050270|gb|AAN41731.1| isopropylmalate isomerase subunit [Shigella flexneri 2a str. 301]
gi|30039878|gb|AAP15612.1| isopropylmalate isomerase subunit [Shigella flexneri 2a str. 2457T]
gi|110613682|gb|ABF02349.1| isopropylmalate isomerase subunit [Shigella flexneri 5 str. 8401]
gi|1786259|gb|AAC73183.1|	478	474	8	gi|110804135|ref|YP_687655.1|	gi|110804135|ref|YP_687655.1|	0.980850676114783523767512217141749	98	466	466	1	0	926	373384	Shigella flexneri 5 str. 8401	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	3-isopropylmalate isomerase subunit, dehydratase component [Escherichia coli K12]	3-isopropylmalate isomerase (dehydratase) subunit [Shigella flexneri 5 str. 8401]
gi|110613683|gb|ABF02350.1| 3-isopropylmalate isomerase (dehydratase) subunit [Shigella flexneri 5 str. 8401]
gi|1786261|gb|AAC73185.1|	371	367	9	gi|75175632|ref|ZP_00695840.1|	gi|75175632|ref|ZP_00695840.1|	0.980850676114783523767512217141749	97	523	523	1	0	998	344609	Shigella boydii BS512	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	2-isopropylmalate synthase [Escherichia coli K12]	COG0119: Isopropylmalate/homocitrate/citramalate synthases [Shigella boydii BS512]
gi|75189176|ref|ZP_00702443.1| COG0119: Isopropylmalate/homocitrate/citramalate synthases [Escherichia coli E24377A]
gi|75194293|ref|ZP_00704363.1| COG0119: Isopropylmalate/homocitrate/citramalate synthases [Escherichia coli HS]
gi|75209404|ref|ZP_00709636.1| COG0119: Isopropylmalate/homocitrate/citramalate synthases [Escherichia coli B171]
gi|75229075|ref|ZP_00715655.1| COG0119: Isopropylmalate/homocitrate/citramalate synthases [Escherichia coli B7A]
gi|75234313|ref|ZP_00718691.1| COG0119: Isopropylmalate/homocitrate/citramalate synthases [Escherichia coli E110019]
gi|75236930|ref|ZP_00720989.1| COG0119: Isopropylmalate/homocitrate/citramalate synthases [Escherichia coli F11]
gi|75256052|ref|ZP_00727765.1| COG0119: Isopropylmalate/homocitrate/citramalate synthases [Escherichia coli E22]
gi|75511702|ref|ZP_00734340.1| COG0119: Isopropylmalate/homocitrate/citramalate synthases [Escherichia coli 53638]
gi|82542678|ref|YP_406625.1| 2-isopropylmalate synthase [Shigella boydii Sb227]
gi|91209136|ref|YP_539122.1| 2-isopropylmalate synthase [Escherichia coli UTI89]
gi|110640287|ref|YP_668015.1| 2-isopropylmalate synthase [Escherichia coli 536]
gi|49065662|sp|Q8FL75|LEU1_ECOL6 2-isopropylmalate synthase (Alpha-isopropylmalate synthase) (Alpha-IPM synthetase)
gi|81244089|gb|ABB64797.1| 2-isopropylmalate synthase [Shigella boydii Sb227]
gi|91070710|gb|ABE05591.1| 2-isopropylmalate synthase [Escherichia coli UTI89]
gi|110341879|gb|ABG68116.1| 2-isopropylmalate synthase [Escherichia coli 536]
gi|1786266|gb|AAC73189.1|	373	363	9	gi|30061643|ref|NP_835814.1|	gi|30061643|ref|NP_835814.1|	0.980850676114783523767512217141749	99	163	163	1	2e-82	307	198215	Shigella flexneri 2a str. 2457T	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	acetolactate synthase III, thiamin-dependent, small subunit [Escherichia coli K12]	acetolactate synthase small subunit [Shigella flexneri 2a str. 2457T]
gi|56479597|ref|NP_706031.2| acetolactate synthase small subunit [Shigella flexneri 2a str. 301]
gi|75189179|ref|ZP_00702446.1| COG0440: Acetolactate synthase, small (regulatory) subunit [Escherichia coli E24377A]
gi|75194296|ref|ZP_00704366.1| COG0440: Acetolactate synthase, small (regulatory) subunit [Escherichia coli HS]
gi|75209400|ref|ZP_00709632.1| COG0440: Acetolactate synthase, small (regulatory) subunit [Escherichia coli B171]
gi|75229072|ref|ZP_00715652.1| COG0440: Acetolactate synthase, small (regulatory) subunit [Escherichia coli B7A]
gi|75234316|ref|ZP_00718694.1| COG0440: Acetolactate synthase, small (regulatory) subunit [Escherichia coli E110019]
gi|75236927|ref|ZP_00720986.1| COG0440: Acetolactate synthase, small (regulatory) subunit [Escherichia coli F11]
gi|75256049|ref|ZP_00727762.1| COG0440: Acetolactate synthase, small (regulatory) subunit [Escherichia coli E22]
gi|110640291|ref|YP_668019.1| acetolactate synthase isozyme III small subunit [Escherichia coli 536]
gi|110804140|ref|YP_687660.1| acetolactate synthase III, valine sensitive, small subunit [Shigella flexneri 5 str. 8401]
gi|30039885|gb|AAP15619.1| acetolactate synthase III, small subunit [Shigella flexneri 2a str. 2457T]
gi|56383148|gb|AAN41738.2| acetolactate synthase III, small subunit [Shigella flexneri 2a str. 301]
gi|110341883|gb|ABG68120.1| acetolactate synthase isozyme III small subunit [Escherichia coli 536]
gi|110613688|gb|ABF02355.1| acetolactate synthase III, valine sensitive, small subunit [Shigella flexneri 5 str. 8401]
gi|1786268|gb|AAC73191.1|	307	287	9	gi|74310698|ref|YP_309117.1|	gi|74310698|ref|YP_309117.1|	0.980850676114783523767512217141749	99	334	334	1	0	662	300269	Shigella sonnei Ss046	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	DNA-binding transcriptional dual regulator [Escherichia coli K12]	transcriptional repressor of fru operon and others [Shigella sonnei Ss046]
gi|73854175|gb|AAZ86882.1| transcriptional repressor of fru operon and others [Shigella sonnei Ss046]
gi|1786269|gb|AAC73192.1|	212	205	6	gi|30061648|ref|NP_835819.1|	gi|30061648|ref|NP_835819.1|	0.980850676114783523767512217141749	98	152	152	1	9e-82	304	198215	Shigella flexneri 2a str. 2457T	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	conserved protein [Escherichia coli K12]	hypothetical protein S0080 [Shigella flexneri 2a str. 2457T]
gi|56479598|ref|NP_706036.2| hypothetical protein SF0078 [Shigella flexneri 2a str. 301]
gi|110804145|ref|YP_687665.1| hypothetical protein SFV_0074 [Shigella flexneri 5 str. 8401]
gi|51316417|sp|Q83MG1|MRAZ_SHIFL Protein mraZ
gi|30039890|gb|AAP15624.1| hypothetical protein S_0080 [Shigella flexneri 2a str. 2457T]
gi|56383149|gb|AAN41743.2| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301]
gi|110613693|gb|ABF02360.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401]
gi|1786270|gb|AAC73193.1|	395	390	8	gi|74310701|ref|YP_309120.1|	gi|74310701|ref|YP_309120.1|	0.980850676114783523767512217141749	95	313	313	1	2e-164	581	300269	Shigella sonnei Ss046	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	S-adenosyl-dependent methyltransferase activity on membrane-located substrates [Escherichia coli K12]	putative apolipoprotein [Shigella sonnei Ss046]
gi|88909219|sp|Q3Z5S7|MRAW_SHISS S-adenosyl-methyltransferase mraW
gi|73854178|gb|AAZ86885.1| putative apolipoprotein [Shigella sonnei Ss046]
gi|1786271|gb|AAC73194.1|	42	40	2	gi|16759116|ref|NP_454733.1|	gi|16759116|ref|NP_454733.1|	0.924894897038167149339529796771127	83	121	121	1	6e-50	198	220341	Salmonella enterica subsp. enterica serovar Typhi str. CT18	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella	membrane bound cell division protein at septum containing leucine zipper motif [Escherichia coli K12]	cell division protein FtsL [Salmonella enterica subsp. enterica serovar Typhi str. CT18]
gi|16763511|ref|NP_459126.1| cell division protein [Salmonella typhimurium LT2]
gi|29140666|ref|NP_804008.1| cell division protein FtsL [Salmonella enterica subsp. enterica serovar Typhi Ty2]
gi|56412393|ref|YP_149468.1| cell division protein FtsL [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150]
gi|25367070|pir||AF0517 cell division protein FtsL [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18)
gi|16418620|gb|AAL19085.1| cell division protein [Salmonella typhimurium LT2]
gi|16501406|emb|CAD01278.1| cell division protein FtsL [Salmonella enterica subsp. enterica serovar Typhi]
gi|29136290|gb|AAO67857.1| cell division protein FtsL [Salmonella enterica subsp. enterica serovar Typhi Ty2]
gi|56126650|gb|AAV76156.1| cell division protein FtsL [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150]
gi|1786272|gb|AAC73195.1|	307	302	5	gi|74310703|ref|YP_309122.1|	gi|74310703|ref|YP_309122.1|	0.980850676114783523767512217141749	96	588	588	1	0	1118	300269	Shigella sonnei Ss046	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	transpeptidase involved in septal peptidoglycan synthesis (penicillin-binding protein 3) [Escherichia coli K12]	septum formation; penicillin-binding protein 3; peptidoglycan synthetase [Shigella sonnei Ss046]
gi|73854180|gb|AAZ86887.1| septum formation; penicillin-binding protein 3; peptidoglycan synthetase [Shigella sonnei Ss046]
gi|1786273|gb|AAC73196.1|	338	321	10	gi|24111530|ref|NP_706040.1	gi|24111530|ref|NP_706040.1	0.980850676114783523767512217141749	89	495	495	1	0	886	198214	Shigella flexneri 2a str. 301	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	UDP-N-acetylmuramoyl-L-alanyl-D-glutamate:meso-diaminopimelate ligase [Escherichia coli K12]	no data
gi|1786274|gb|AAC73197.1|	377	367	4	gi|74310705|ref|YP_309124.1|	gi|74310705|ref|YP_309124.1|	0.980850676114783523767512217141749	95	452	452	1	0	839	300269	Shigella sonnei Ss046	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase [Escherichia coli K12]	D-alanine:D-alanine-adding enzyme [Shigella sonnei Ss046]
gi|75175643|ref|ZP_00695851.1| COG0770: UDP-N-acetylmuramyl pentapeptide synthase [Shigella boydii BS512]
gi|75189186|ref|ZP_00702453.1| COG0770: UDP-N-acetylmuramyl pentapeptide synthase [Escherichia coli E24377A]
gi|75194303|ref|ZP_00704373.1| COG0770: UDP-N-acetylmuramyl pentapeptide synthase [Escherichia coli HS]
gi|75209393|ref|ZP_00709625.1| COG0770: UDP-N-acetylmuramyl pentapeptide synthase [Escherichia coli B171]
gi|75229065|ref|ZP_00715645.1| COG0770: UDP-N-acetylmuramyl pentapeptide synthase [Escherichia coli B7A]
gi|75234323|ref|ZP_00718701.1| COG0770: UDP-N-acetylmuramyl pentapeptide synthase [Escherichia coli E110019]
gi|75256042|ref|ZP_00727755.1| COG0770: UDP-N-acetylmuramyl pentapeptide synthase [Escherichia coli E22]
gi|75511690|ref|ZP_00734328.1| COG0770: UDP-N-acetylmuramyl pentapeptide synthase [Escherichia coli 53638]
gi|82542690|ref|YP_406637.1| D-alanine:D-alanine-adding enzyme [Shigella boydii Sb227]
gi|83585192|ref|ZP_00923842.1| COG0770: UDP-N-acetylmuramyl pentapeptide synthase [Escherichia coli 101-1]
gi|73854182|gb|AAZ86889.1| D-alanine:D-alanine-adding enzyme [Shigella sonnei Ss046]
gi|81244101|gb|ABB64809.1| D-alanine:D-alanine-adding enzyme [Shigella boydii Sb227]
gi|1786275|gb|AAC73198.1|	261	254	11	gi|16759120|ref|NP_454737.1|	gi|16759120|ref|NP_454737.1|	0.924894897038167149339529796771127	88	360	360	1	2e-179	631	220341	Salmonella enterica subsp. enterica serovar Typhi str. CT18	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella	phospho-N-acetylmuramoyl-pentapeptide transferase [Escherichia coli K12]	phospho-N-acetylmuramoyl-pentapeptide-transferase [Salmonella enterica subsp. enterica serovar Typhi str. CT18]
gi|29140670|ref|NP_804012.1| phospho-N-acetylmuramoyl-pentapeptide-transferase [Salmonella enterica subsp. enterica serovar Typhi Ty2]
gi|62178692|ref|YP_215109.1| phospho-N-acetylmuramoyl-pentapeptide-transferase [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67]
gi|22095891|sp|Q8Z9H1|MRAY_SALTI Phospho-N-acetylmuramoyl-pentapeptide-transferase (UDP-MurNAc-pentapeptide phosphotransferase)
gi|75484867|sp|Q57TD3|MRAY_SALCH Phospho-N-acetylmuramoyl-pentapeptide-transferase (UDP-MurNAc-pentapeptide phosphotransferase)
gi|25288754|pir||AB0518 phospho-N-acetylmuramoyl-pentapeptide- transferase [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18)
gi|16501410|emb|CAD01282.1| phospho-N-acetylmuramoyl-pentapeptide- transferase [Salmonella enterica subsp. enterica serovar Typhi]
gi|29136294|gb|AAO67861.1| phospho-N-acetylmuramoyl-pentapeptide- transferase [Salmonella enterica subsp. enterica serovar Typhi Ty2]
gi|62126325|gb|AAX64028.1| phospho-N-acetylmuramoyl-pentapeptide transferase [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67]
gi|1786276|gb|AAC73199.1|	191	180	10	gi|24111533|ref|NP_706043.1|	gi|24111533|ref|NP_706043.1|	0.980850676114783523767512217141749	90	438	438	1	0	776	198214	Shigella flexneri 2a str. 301	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase [Escherichia coli K12]	UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Shigella flexneri 2a str. 301]
gi|62900692|sp|Q83MF9|MURD_SHIFL UDP-N-acetylmuramoylalanine--D-glutamate ligase (UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase) (D-glutamic acid-adding enzyme)
gi|24050291|gb|AAN41750.1| UDP-N-acetylmuramoylalanine-D-glutamate ligase [Shigella flexneri 2a str. 301]
gi|1786277|gb|AAC73200.1|	302	297	4	gi|75175646|ref|ZP_00695854.1|	gi|75175646|ref|ZP_00695854.1|	0.980850676114783523767512217141749	86	414	414	1	0	697	344609	Shigella boydii BS512	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	integral membrane protein involved in stabilizing FstZ ring during cell division [Escherichia coli K12]	COG0772: Bacterial cell division membrane protein [Shigella boydii BS512]
gi|82542693|ref|YP_406640.1| FtsW [Shigella boydii Sb227]
gi|81244104|gb|ABB64812.1| FtsW [Shigella boydii Sb227]
gi|1786278|gb|AAC73201.1|	342	333	8	gi|74310709|ref|YP_309128.1|	gi|74310709|ref|YP_309128.1|	0.980850676114783523767512217141749	99	355	355	1	0	705	300269	Shigella sonnei Ss046	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	N-acetylglucosaminyl transferase [Escherichia coli K12]	UDP-N-acetylglucosamine:N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [Shigella sonnei Ss046]
gi|75209389|ref|ZP_00709621.1| COG0707: UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Escherichia coli B171]
gi|75229061|ref|ZP_00715641.1| COG0707: UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Escherichia coli B7A]
gi|75256038|ref|ZP_00727751.1| COG0707: UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Escherichia coli E22]
gi|82542694|ref|YP_406641.1| UDP-N-acetylglucosamine:N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [Shigella boydii Sb227]
gi|90109833|sp|Q326E5|MURG_SHIBS UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase)
gi|110826508|sp|Q3Z5R9|MURG_SHISS UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase)
gi|73854186|gb|AAZ86893.1| UDP-N-acetylglucosamine:N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [Shigella sonnei Ss046]
gi|81244105|gb|ABB64813.1| UDP-N-acetylglucosamine:N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [Shigella boydii Sb227]
gi|1786279|gb|AAC73202.1|	355	350	9	gi|110804155|ref|YP_687675.1|	gi|110804155|ref|YP_687675.1|	0.980850676114783523767512217141749	92	491	491	1	0	907	373384	Shigella flexneri 5 str. 8401	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	UDP-N-acetylmuramate:L-alanine ligase [Escherichia coli K12]	L-alanine adding enzyme, UDP-N-acetyl-muramate:alanine ligase [Shigella flexneri 5 str. 8401]
gi|110613703|gb|ABF02370.1| L-alanine adding enzyme, UDP-N-acetyl-muramate:alanine ligase [Shigella flexneri 5 str. 8401]
gi|1786280|gb|AAC73203.1|	392	381	7	gi|75175649|ref|ZP_00695857.1|	gi|75175649|ref|ZP_00695857.1|	0.980850676114783523767512217141749	99	306	306	1	1e-169	599	344609	Shigella boydii BS512	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	D-alanine:D-alanine ligase [Escherichia coli K12]	COG1181: D-alanine-D-alanine ligase and related ATP-grasp enzymes [Shigella boydii BS512]
gi|82542696|ref|YP_406643.1| D-alanine-D-alanine ligase B [Shigella boydii Sb227]
gi|81244107|gb|ABB64815.1| D-alanine-D-alanine ligase B [Shigella boydii Sb227]
gi|1786281|gb|AAC73204.1|	119	115	6	gi|82775500|ref|YP_401847.1|	gi|82775500|ref|YP_401847.1|	0.980850676114783523767512217141749	92	276	265	0.960144927536231884057971014492754	9e-137	489	300267	Shigella dysenteriae Sd197	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	membrane anchored protein involved in growth of wall at septum [Escherichia coli K12]	cell division protein [Shigella dysenteriae Sd197]
gi|81239648|gb|ABB60358.1| cell division protein [Shigella dysenteriae Sd197]
gi|1786282|gb|AAC73205.1|	366	363	8	gi|78100129|sp|P0ABH3|FTSA_SHIFL	gi|78100129|sp|P0ABH3|FTSA_SHIFL	0.980850676114783523767512217141749	100	420	420	1	0	829	623	Shigella flexneri	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	ATP-binding cell division protein involved in recruitment of FtsK to Z ring [Escherichia coli K12]	Cell division protein ftsA
gi|1786284|gb|AAC73206.1|	486	479	14	gi|74310714|ref|YP_309133.1|	gi|74310714|ref|YP_309133.1|	0.980850676114783523767512217141749	87	383	383	1	0	639	300269	Shigella sonnei Ss046	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	GTP-binding tubulin-like cell division protein [Escherichia coli K12]	FtsZ [Shigella sonnei Ss046]
gi|73854191|gb|AAZ86898.1| FtsZ [Shigella sonnei Ss046]
gi|1786285|gb|AAC73207.1|	319	311	16	gi|82542699|ref|YP_406647.1|	gi|82542699|ref|YP_406647.1|	0.980850676114783523767512217141749	99	305	305	1	1e-173	611	300268	Shigella boydii Sb227	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	UDP-3-O-acyl N-acetylglucosamine deacetylase [Escherichia coli K12]	UDP-3-O-acyl N-acetylglucosamine deacetylase [Shigella boydii Sb227]
gi|81244110|gb|ABB64818.1| UDP-3-O-acyl N-acetylglucosamine deacetylase [Shigella boydii Sb227]
gi|1786287|gb|AAC73209.1|	285	277	11	gi|24111543|ref|NP_706053.1|	gi|24111543|ref|NP_706053.1|	0.980850676114783523767512217141749	97	901	901	1	0	1730	198214	Shigella flexneri 2a str. 301	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	preprotein translocase subunit, ATPase [Escherichia coli K12]	translocase [Shigella flexneri 2a str. 301]
gi|30061665|ref|NP_835836.1| translocase [Shigella flexneri 2a str. 2457T]
gi|24050302|gb|AAN41760.1| preprotein translocase; secretion protein [Shigella flexneri 2a str. 301]
gi|30039907|gb|AAP15641.1| preprotein translocase; secretion protein [Shigella flexneri 2a str. 2457T]
gi|1786288|gb|AAC73210.1|	363	332	4	gi|74310718|ref|YP_309137.1|	gi|74310718|ref|YP_309137.1|	0.980850676114783523767512217141749	99	129	129	1	2e-71	269	300269	Shigella sonnei Ss046	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	nucleoside triphosphate pyrophosphohydrolase, marked preference for dGTP [Escherichia coli K12]	7,8-dihydro-8-oxoguanine-triphosphatase [Shigella sonnei Ss046]
gi|75194316|ref|ZP_00704386.1| COG0494: NTP pyrophosphohydrolases including oxidative damage repair enzymes [Escherichia coli HS]
gi|75208413|ref|ZP_00708745.1| COG0494: NTP pyrophosphohydrolases including oxidative damage repair enzymes [Escherichia coli B171]
gi|75226879|ref|ZP_00713776.1| COG0494: NTP pyrophosphohydrolases including oxidative damage repair enzymes [Escherichia coli B7A]
gi|75233828|ref|ZP_00718298.1| COG0494: NTP pyrophosphohydrolases including oxidative damage repair enzymes [Escherichia coli E110019]
gi|75258906|ref|ZP_00730296.1| COG0494: NTP pyrophosphohydrolases including oxidative damage repair enzymes [Escherichia coli E22]
gi|73854195|gb|AAZ86902.1| 7,8-dihydro-8-oxoguanine-triphosphatase [Shigella sonnei Ss046]
gi|1786290|gb|AAC73212.1|	117	113	1	gi|83569679|ref|ZP_00921129.1|	gi|83569679|ref|ZP_00921129.1|	0.980850676114783523767512217141749	98	65	65	1	5e-33	142	358708	Shigella dysenteriae 1012	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	conserved protein [Escherichia coli K12]	COG3024: Uncharacterized protein conserved in bacteria [Shigella dysenteriae 1012]
gi|1786291|gb|AAC73213.1|	94	89	7	gi|82775509|ref|YP_401856.1|	gi|82775509|ref|YP_401856.1|	0.980850676114783523767512217141749	94	247	247	1	5e-130	466	300267	Shigella dysenteriae Sd197	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	conserved protein [Escherichia coli K12]	hypothetical protein SDY_0132 [Shigella dysenteriae Sd197]
gi|81239657|gb|ABB60367.1| conserved hypothetical protein [Shigella dysenteriae Sd197]
gi|1786292|gb|AAC73214.1|	458	442	3	gi|75176549|ref|ZP_00696686.1|	gi|75176549|ref|ZP_00696686.1|	0.980850676114783523767512217141749	94	206	206	1	2e-103	377	344609	Shigella boydii BS512	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	dephospho-CoA kinase [Escherichia coli K12]	COG0237: Dephospho-CoA kinase [Shigella boydii BS512]
gi|1786293|gb|AAC73215.1|	409	395	9	gi|82775511|ref|YP_401858.1|	gi|82775511|ref|YP_401858.1|	0.980850676114783523767512217141749	99	347	347	1	0	691	300267	Shigella dysenteriae Sd197	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	GMP reductase [Escherichia coli K12]	GMP reductase [Shigella dysenteriae Sd197]
gi|81239659|gb|ABB60369.1| GMP reductase [Shigella dysenteriae Sd197]
gi|1786295|gb|AAC73217.1|	292	271	5	gi|74310725|ref|YP_309144.1|	gi|74310725|ref|YP_309144.1|	0.980850676114783523767512217141749	89	400	400	1	0	705	300269	Shigella sonnei Ss046	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	assembly protein in type IV pilin biogenesis, transmembrane protein [Escherichia coli K12]	putative integral membrane protein [Shigella sonnei Ss046]
gi|73854202|gb|AAZ86909.1| putative integral membrane protein [Shigella sonnei Ss046]
gi|1786296|gb|AAC73218.1|	499	473	2	gi|83569687|ref|ZP_00921137.1|	gi|83569687|ref|ZP_00921137.1|	0.980850676114783523767512217141749	98	461	461	1	0	909	358708	Shigella dysenteriae 1012	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	conserved protein with nucleoside triphosphate hydrolase domain [Escherichia coli K12]	COG2804: Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB [Shigella dysenteriae 1012]
gi|1786297|gb|AAC73219.1|	100	93	2	gi|24111552|ref|NP_706062.1|	gi|24111552|ref|NP_706062.1|	0.980850676114783523767512217141749	91	146	146	1	7e-72	271	198214	Shigella flexneri 2a str. 301	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	predicted major pilin subunit [Escherichia coli K12]	prelipin peptidase dependent protein [Shigella flexneri 2a str. 301]
gi|30061674|ref|NP_835845.1| prelipin peptidase dependent protein [Shigella flexneri 2a str. 2457T]
gi|110804169|ref|YP_687689.1| prelipin peptidase dependent protein [Shigella flexneri 5 str. 8401]
gi|24050312|gb|AAN41769.1| prelipin peptidase dependent protein [Shigella flexneri 2a str. 301]
gi|30039916|gb|AAP15650.1| prelipin peptidase dependent protein [Shigella flexneri 2a str. 2457T]
gi|110613717|gb|ABF02384.1| prelipin peptidase dependent protein [Shigella flexneri 5 str. 8401]
gi|1786299|gb|AAC73220.1|	399	389	4	gi|82775515|ref|YP_401862.1|	gi|82775515|ref|YP_401862.1|	0.980850676114783523767512217141749	94	297	297	1	5e-155	550	300267	Shigella dysenteriae Sd197	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	quinolinate phosphoribosyltransferase [Escherichia coli K12]	quinolinate phosphoribosyltransferase [Shigella dysenteriae Sd197]
gi|81239663|gb|ABB60373.1| quinolinate phosphoribosyltransferase [Shigella dysenteriae Sd197]
gi|1786300|gb|AAC73221.1|	213	196	3	gi|82775516|ref|YP_401863.1|	gi|82775516|ref|YP_401863.1|	0.980850676114783523767512217141749	98	183	183	1	6e-106	385	300267	Shigella dysenteriae Sd197	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	N-acetyl-anhydromuranmyl-L-alanine amidase [Escherichia coli K12]	regulates ampC [Shigella dysenteriae Sd197]
gi|81239664|gb|ABB60374.1| regulates ampC [Shigella dysenteriae Sd197]
gi|1786301|gb|AAC73222.1|	28	21	4	gi|82775517|ref|YP_401864.1|	gi|82775517|ref|YP_401864.1|	0.980850676114783523767512217141749	96	284	284	1	4e-155	550	300267	Shigella dysenteriae Sd197	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	predicted inner membrane protein [Escherichia coli K12]	regulates ampC [Shigella dysenteriae Sd197]
gi|81239665|gb|ABB60375.1| regulates ampC [Shigella dysenteriae Sd197]
gi|1786302|gb|AAC73223.1|	482	441	10	gi|74310730|ref|YP_309149.1|	gi|74310730|ref|YP_309149.1|	0.980850676114783523767512217141749	93	457	457	1	0	846	300269	Shigella sonnei Ss046	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	aromatic amino acid transporter [Escherichia coli K12]	aromatic amino acid transport protein [Shigella sonnei Ss046]
gi|73854207|gb|AAZ86914.1| aromatic amino acid transport protein [Shigella sonnei Ss046]
gi|1786303|gb|AAC73224.1|	345	334	5	gi|82775519|ref|YP_401866.1|	gi|82775519|ref|YP_401866.1|	0.980850676114783523767512217141749	100	254	228	0.897637795275590551181102362204724	1e-123	445	300267	Shigella dysenteriae Sd197	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	DNA-binding transcriptional dual regulator [Escherichia coli K12]	transcriptional regulator for pyruvate dehydrogenase complex [Shigella dysenteriae Sd197]
gi|81239667|gb|ABB60377.1| transcriptional regulator for pyruvate dehydrogenase complex [Shigella dysenteriae Sd197]
gi|1786304|gb|AAC73225.1|	268	259	17	gi|24111558|ref|NP_706068.1|	gi|24111558|ref|NP_706068.1|	0.980850676114783523767512217141749	99	887	887	1	0	1799	198214	Shigella flexneri 2a str. 301	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	pyruvate dehydrogenase, decarboxylase component E1, thiamin-binding [Escherichia coli K12]	pyruvate dehydrogenase (decarboxylase component) [Shigella flexneri 2a str. 301]
gi|30061680|ref|NP_835851.1| pyruvate dehydrogenase (decarboxylase component) [Shigella flexneri 2a str. 2457T]
gi|24050318|gb|AAN41775.1| pyruvate dehydrogenase (decarboxylase component) [Shigella flexneri 2a str. 301]
gi|30039922|gb|AAP15656.1| pyruvate dehydrogenase (decarboxylase component) [Shigella flexneri 2a str. 2457T]
gi|1786305|gb|AAC73226.1|	160	154	9	gi|74310733|ref|YP_309152.1|	gi|74310733|ref|YP_309152.1|	0.980850676114783523767512217141749	81	630	630	1	0	962	300269	Shigella sonnei Ss046	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	pyruvate dehydrogenase, dihydrolipoyltransacetylase component E2 [Escherichia coli K12]	pyruvate dehydrogenase dihydrolipoyltransacetylase component [Shigella sonnei Ss046]
gi|73854210|gb|AAZ86917.1| pyruvate dehydrogenase dihydrolipoyltransacetylase component [Shigella sonnei Ss046]
gi|1786307|gb|AAC73227.1|	494	487	20	gi|110804177|ref|YP_687697.1|	gi|110804177|ref|YP_687697.1|	0.980850676114783523767512217141749	96	474	474	1	0	908	373384	Shigella flexneri 5 str. 8401	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	lipoamide dehydrogenase, E3 component is part of three enzyme complexes [Escherichia coli K12]	dihydrolipoamide dehydrogenase [Shigella flexneri 5 str. 8401]
gi|434012|emb|CAA24742.1| unnamed protein product [Escherichia coli]
gi|110613725|gb|ABF02392.1| dihydrolipoamide dehydrogenase [Shigella flexneri 5 str. 8401]
gi|1786308|gb|AAC73228.1|	20	8	3	gi|110804178|ref|YP_687698.1|	gi|110804178|ref|YP_687698.1|	0.980850676114783523767512217141749	85	617	615	0.996758508914100486223662884927066	0	1036	373384	Shigella flexneri 5 str. 8401	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	predicted protein [Escherichia coli K12]	hypothetical protein SFV_0108 [Shigella flexneri 5 str. 8401]
gi|110613726|gb|ABF02393.1| putative membrane protein [Shigella flexneri 5 str. 8401]
gi|1786311|gb|AAC73231.1|	57	54	5	gi|82775409|ref|YP_401755.1|	gi|82775409|ref|YP_401755.1|	0.980850676114783523767512217141749	99	264	264	1	2e-152	541	300267	Shigella dysenteriae Sd197	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	S-adenosylmethionine decarboxylase [Escherichia coli K12]	S-adenosylmethionine decarboxylase [Shigella dysenteriae Sd197]
gi|81239557|gb|ABB60267.1| S-adenosylmethionine decarboxylase [Shigella dysenteriae Sd197]
gi|1786312|gb|AAC73232.1|	357	352	9	gi|24111564|ref|NP_706074.1|	gi|24111564|ref|NP_706074.1|	0.980850676114783523767512217141749	99	288	288	1	6e-169	596	198214	Shigella flexneri 2a str. 301	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	spermidine synthase (putrescine aminopropyltransferase) [Escherichia coli K12]	spermidine synthase [Shigella flexneri 2a str. 301]
gi|30061686|ref|NP_835857.1| spermidine synthase [Shigella flexneri 2a str. 2457T]
gi|110804182|ref|YP_687702.1| spermidine synthase [Shigella flexneri 5 str. 8401]
gi|45477296|sp|Q83MF0|SPEE_SHIFL Spermidine synthase (Putrescine aminopropyltransferase) (SPDSY)
gi|24050326|gb|AAN41781.1| spermidine synthase, putrescine aminopropyltransferase [Shigella flexneri 2a str. 301]
gi|30039928|gb|AAP15662.1| spermidine synthase, putrescine aminopropyltransferase [Shigella flexneri 2a str. 2457T]
gi|110613730|gb|ABF02397.1| spermidine synthase [Shigella flexneri 5 str. 8401]
gi|1786314|gb|AAC73234.1|	61	47	6	gi|83569704|ref|ZP_00921154.1|	gi|83569704|ref|ZP_00921154.1|	0.980850676114783523767512217141749	91	516	516	1	0	949	358708	Shigella dysenteriae 1012	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	multicopper oxidase (laccase) [Escherichia coli K12]	COG2132: Putative multicopper oxidases [Shigella dysenteriae 1012]
gi|1786316|gb|AAC73235.1|	106	97	11	gi|110804185|ref|YP_687705.1|	gi|110804185|ref|YP_687705.1|	0.980850676114783523767512217141749	93	796	796	1	0	1534	373384	Shigella flexneri 5 str. 8401	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	glucose dehydrogenase [Escherichia coli K12]	glucose dehydrogenase [Shigella flexneri 5 str. 8401]
gi|110613733|gb|ABF02400.1| glucose dehydrogenase [Shigella flexneri 5 str. 8401]
gi|1786318|gb|AAC73237.1|	222	213	4	gi|82542729|ref|YP_406676.1|	gi|82542729|ref|YP_406676.1|	0.980850676114783523767512217141749	94	220	220	1	9e-117	422	300268	Shigella boydii Sb227	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	carbonic anhydrase [Escherichia coli K12]	putative carbonic anhdrase [Shigella boydii Sb227]
gi|81244140|gb|ABB64848.1| putative carbonic anhdrase [Shigella boydii Sb227]
gi|1786319|gb|AAC73238.1|	497	487	10	gi|83569708|ref|ZP_00921158.1|	gi|83569708|ref|ZP_00921158.1|	0.980850676114783523767512217141749	99	308	308	1	4e-170	600	358708	Shigella dysenteriae 1012	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	predicted transporter subunit: ATP-binding component of ABC superfamily [Escherichia coli K12]	COG1131: ABC-type multidrug transport system, ATPase component [Shigella dysenteriae 1012]
gi|1786320|gb|AAC73239.1|	266	261	4	gi|75176523|ref|ZP_00696660.1|	gi|75176523|ref|ZP_00696660.1|	0.980850676114783523767512217141749	88	256	256	1	1e-125	452	344609	Shigella boydii BS512	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	predicted transporter subunit: membrane component of ABC superfamily [Escherichia coli K12]	COG0842: ABC-type multidrug transport system, permease component [Shigella boydii BS512]
gi|82542731|ref|YP_406678.1| hypothetical protein SBO_0117 [Shigella boydii Sb227]
gi|81244142|gb|ABB64850.1| conserved hypothetical protein [Shigella boydii Sb227]
gi|1786321|gb|AAC73240.1|	52	42	3	gi|74310747|ref|YP_309166.1|	gi|74310747|ref|YP_309166.1|	0.980850676114783523767512217141749	99	146	146	1	6e-81	301	300269	Shigella sonnei Ss046	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	predicted PTS Enzyme IIA [Escherichia coli K12]	putative PTS system enzyme IIB component [Shigella sonnei Ss046]
gi|75189228|ref|ZP_00702495.1| COG2893: Phosphotransferase system, mannose/fructose-specific component IIA [Escherichia coli E24377A]
gi|75230506|ref|ZP_00716987.1| COG2893: Phosphotransferase system, mannose/fructose-specific component IIA [Escherichia coli B7A]
gi|75238836|ref|ZP_00722818.1| COG2893: Phosphotransferase system, mannose/fructose-specific component IIA [Escherichia coli E110019]
gi|75258878|ref|ZP_00730268.1| COG2893: Phosphotransferase system, mannose/fructose-specific component IIA [Escherichia coli E22]
gi|83569710|ref|ZP_00921160.1| COG2893: Phosphotransferase system, mannose/fructose-specific component IIA [Shigella dysenteriae 1012]
gi|73854224|gb|AAZ86931.1| putative PTS system enzyme IIB component [Shigella sonnei Ss046]
gi|1786322|gb|AAC73241.1|	29	22	4	gi|74310748|ref|YP_309167.1|	gi|74310748|ref|YP_309167.1|	0.980850676114783523767512217141749	98	409	409	1	0	817	300269	Shigella sonnei Ss046	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	predicted polysaccharide deacetylase lipoprotein [Escherichia coli K12]	hypothetical protein SSO_0138 [Shigella sonnei Ss046]
gi|73854225|gb|AAZ86932.1| conserved hypothetical protein [Shigella sonnei Ss046]
gi|1786323|gb|AAC73242.1|	252	239	1	gi|16759172|ref|NP_454789.1|	gi|16759172|ref|NP_454789.1|	0.924894897038167149339529796771127	96	126	126	1	1e-63	243	220341	Salmonella enterica subsp. enterica serovar Typhi str. CT18	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella	aspartate 1-decarboxylase [Escherichia coli K12]	aspartate 1-decarboxylase precursor [Salmonella enterica subsp. enterica serovar Typhi str. CT18]
gi|16763570|ref|NP_459185.1| aspartate 1-decarboxylase precursor [Salmonella typhimurium LT2]
gi|29140722|ref|NP_804064.1| aspartate 1-decarboxylase precursor [Salmonella enterica subsp. enterica serovar Typhi Ty2]
gi|56412456|ref|YP_149531.1| aspartate 1-decarboxylase precursor [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150]
gi|62178750|ref|YP_215167.1| aspartate 1-decarboxylase precursor [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67]
gi|54038816|sp|P65663|PAND_SALTI Aspartate 1-decarboxylase precursor (Aspartate alpha-decarboxylase) [Contains: Aspartate 1-decarboxylase beta chain; Aspartate 1-decarboxylase alpha chain]
gi|54041702|sp|P65662|PAND_SALTY Aspartate 1-decarboxylase precursor (Aspartate alpha-decarboxylase) [Contains: Aspartate 1-decarboxylase beta chain; Aspartate 1-decarboxylase alpha chain]
gi|67460762|sp|Q5PDB9|PAND_SALPA Aspartate 1-decarboxylase precursor (Aspartate alpha-decarboxylase) [Contains: Aspartate 1-decarboxylase beta chain; Aspartate 1-decarboxylase alpha chain]
gi|75484822|sp|Q57T75|PAND_SALCH Aspartate 1-decarboxylase precursor (Aspartate alpha-decarboxylase) [Contains: Aspartate 1-decarboxylase beta chain; Aspartate 1-decarboxylase alpha chain]
gi|25324482|pir||AF0524 aspartate 1-decarboxylase [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18)
gi|16418682|gb|AAL19144.1| aspartate 1-decarboxylase [Salmonella typhimurium LT2]
gi|16501462|emb|CAD01334.1| aspartate 1-decarboxylase [Salmonella enterica subsp. enterica serovar Typhi]
gi|29136346|gb|AAO67913.1| aspartate 1-decarboxylase [Salmonella enterica subsp. enterica serovar Typhi Ty2]
gi|56126713|gb|AAV76219.1| aspartate 1-decarboxylase [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150]
gi|62126383|gb|AAX64086.1| aspartate 1-decarboxylase [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67]
gi|1786324|gb|AAC73243.1|	158	102	4	gi|24111575|ref|NP_706085.1|	gi|24111575|ref|NP_706085.1|	0.980850676114783523767512217141749	97	300	300	1	1e-166	589	198214	Shigella flexneri 2a str. 301	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	predicted transposase [Escherichia coli K12]	hypothetical protein SF0129 [Shigella flexneri 2a str. 301]
gi|30061697|ref|NP_835868.1| hypothetical protein S0131 [Shigella flexneri 2a str. 2457T]
gi|110804192|ref|YP_687712.1| hypothetical protein SFV_0122 [Shigella flexneri 5 str. 8401]
gi|24050338|gb|AAN41792.1| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301]
gi|30039939|gb|AAP15673.1| hypothetical protein S_0131 [Shigella flexneri 2a str. 2457T]
gi|110613740|gb|ABF02407.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401]
gi|1786325|gb|AAC73244.1|	428	417	3	gi|24111576|ref|NP_706086.1|	gi|24111576|ref|NP_706086.1|	0.980850676114783523767512217141749	95	283	283	1	6e-147	523	198214	Shigella flexneri 2a str. 301	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	pantothenate synthetase [Escherichia coli K12]	pantoate--beta-alanine ligase [Shigella flexneri 2a str. 301]
gi|30061698|ref|NP_835869.1| pantoate--beta-alanine ligase [Shigella flexneri 2a str. 2457T]
gi|110804193|ref|YP_687713.1| pantothenate synthetase [Shigella flexneri 5 str. 8401]
gi|78099059|sp|Q83SM0|PANC_SHIFL Pantoate--beta-alanine ligase (Pantothenate synthetase) (Pantoate-activating enzyme)
gi|24050339|gb|AAN41793.1| pantothenate synthetase [Shigella flexneri 2a str. 301]
gi|30039940|gb|AAP15674.1| pantothenate synthetase [Shigella flexneri 2a str. 2457T]
gi|110613741|gb|ABF02408.1| pantothenate synthetase [Shigella flexneri 5 str. 8401]
gi|1786326|gb|AAC73245.1|	385	373	7	gi|74310752|ref|YP_309171.1|	gi|74310752|ref|YP_309171.1|	0.980850676114783523767512217141749	90	264	264	1	2e-133	478	300269	Shigella sonnei Ss046	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	3-methyl-2-oxobutanoate hydroxymethyltransferase [Escherichia coli K12]	3-methyl-2-oxobutanoate hydroxymethyltransferase [Shigella sonnei Ss046]
gi|73854229|gb|AAZ86936.1| 3-methyl-2-oxobutanoate hydroxymethyltransferase [Shigella sonnei Ss046]
gi|1786328|gb|AAC73246.1|	7	2	2	gi|28882463|gb|AAO49827.1|	gi|28882463|gb|AAO49827.1|	0.924894897038167149339529796771127	31	412	416	1.00970873786407766990291262135922	9e-37	158	98360	Salmonella enterica subsp. enterica serovar Dublin	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella	predicted fimbrial-like adhesin protein [Escherichia coli K12]	putative fimbrial-like protein YadC [Salmonella enterica subsp. enterica serovar Dublin]
gi|1786329|gb|AAC73247.1|	8	4	1	gi|74310755|ref|YP_309174.1|	gi|74310755|ref|YP_309174.1|	0.980850676114783523767512217141749	83	198	198	1	7e-91	335	300269	Shigella sonnei Ss046	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	predicted fimbrial-like adhesin protein [Escherichia coli K12]	putative fimbrial protein [Shigella sonnei Ss046]
gi|73854232|gb|AAZ86939.1| putative fimbrial protein [Shigella sonnei Ss046]
gi|1786330|gb|AAC73248.1|	12	4	1	gi|74310756|ref|YP_309175.1|	gi|74310756|ref|YP_309175.1|	0.980850676114783523767512217141749	76	201	200	0.995024875621890547263681592039801	7e-78	292	300269	Shigella sonnei Ss046	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	predicted fimbrial-like adhesin protein [Escherichia coli K12]	putative fimbrial protein [Shigella sonnei Ss046]
gi|73854233|gb|AAZ86940.1| putative fimbrial protein [Shigella sonnei Ss046]
gi|1786332|gb|AAC73250.1|	274	147	1	gi|83569720|ref|ZP_00921170.1|	gi|83569720|ref|ZP_00921170.1|	0.980850676114783523767512217141749	92	865	660	0.763005780346820809248554913294798	0	1221	358708	Shigella dysenteriae 1012	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	predicted outer membrane usher protein [Escherichia coli K12]	COG3188: P pilus assembly protein, porin PapC [Shigella dysenteriae 1012]
gi|1786333|gb|AAC73251.1|	366	236	2	gi|74310761|ref|YP_309180.1|	gi|74310761|ref|YP_309180.1|	0.980850676114783523767512217141749	98	246	246	1	7e-137	489	300269	Shigella sonnei Ss046	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	predicted periplasmic pilin chaperone [Escherichia coli K12]	probable pilin chaperone similar to PapD [Shigella sonnei Ss046]
gi|73854238|gb|AAZ86945.1| probable pilin chaperone similar to PapD [Shigella sonnei Ss046]
gi|1786334|gb|AAC73252.1|	12	4	1	gi|83569722|ref|ZP_00921172.1|	gi|83569722|ref|ZP_00921172.1|	0.980850676114783523767512217141749	99	194	194	1	3e-105	383	358708	Shigella dysenteriae 1012	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	predicted fimbrial-like adhesin protein [Escherichia coli K12]	COG3539: P pilus assembly protein, pilin FimA [Shigella dysenteriae 1012]
gi|1786335|gb|AAC73253.1|	461	443	5	gi|74310763|ref|YP_309182.1|	gi|74310763|ref|YP_309182.1|	0.980850676114783523767512217141749	95	159	159	1	2e-84	313	300269	Shigella sonnei Ss046	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	2-amino-4-hydroxy-6-hydroxymethyldihyropteridine pyrophosphokinase [Escherichia coli K12]	7,8-dihydro-6-hydroxymethylpterin- pyrophosphokinase [Shigella sonnei Ss046]
gi|73854240|gb|AAZ86947.1| 7,8-dihydro-6-hydroxymethylpterin- pyrophosphokinase [Shigella sonnei Ss046]
gi|1786337|gb|AAC73255.1|	129	118	7	gi|74310765|ref|YP_309184.1|	gi|74310765|ref|YP_309184.1|	0.980850676114783523767512217141749	99	308	308	1	0	636	300269	Shigella sonnei Ss046	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	glutamyl-Q tRNA(Asp) synthetase [Escherichia coli K12]	putative tRNA synthetase [Shigella sonnei Ss046]
gi|73854242|gb|AAZ86949.1| putative tRNA synthetase [Shigella sonnei Ss046]
gi|1786338|gb|AAC73256.1|	228	222	8	gi|16759185|ref|NP_454802.1|	gi|16759185|ref|NP_454802.1|	0.924894897038167149339529796771127	88	151	151	1	1e-71	270	220341	Salmonella enterica subsp. enterica serovar Typhi str. CT18	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella	DNA-binding transcriptional regulator of rRNA transcription, DnaK suppressor protein [Escherichia coli K12]	dosage-dependent dnaK suppressor protein [Salmonella enterica subsp. enterica serovar Typhi str. CT18]
gi|16763576|ref|NP_459191.1| dnaK suppressor protein [Salmonella typhimurium LT2]
gi|29140735|ref|NP_804077.1| dosage-dependent dnaK suppressor protein [Salmonella enterica subsp. enterica serovar Typhi Ty2]
gi|56412462|ref|YP_149537.1| dosage-dependent dnaK suppressor protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150]
gi|60392187|sp|P0A1G5|DKSA_SALTY DnaK suppressor protein
gi|60392188|sp|P0A1G6|DKSA_SALTI DnaK suppressor protein
gi|25332014|pir||AC0526 dosage-dependent dnaK suppressor protein [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18)
gi|4102204|gb|AAD01437.1| DksA homolog [Salmonella typhimurium]
gi|16418688|gb|AAL19150.1| dnaK suppressor protein [Salmonella typhimurium LT2]
gi|16501475|emb|CAD01347.1| dosage-dependent dnaK suppressor protein [Salmonella enterica subsp. enterica serovar Typhi]
gi|29136359|gb|AAO67926.1| dosage-dependent dnaK suppressor protein [Salmonella enterica subsp. enterica serovar Typhi Ty2]
gi|56126719|gb|AAV76225.1| dosage-dependent dnaK suppressor protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150]
gi|1786340|gb|AAC73257.1|	212	205	7	gi|24111584|ref|NP_706094.1|	gi|24111584|ref|NP_706094.1|	0.980850676114783523767512217141749	99	234	234	1	3e-130	467	198214	Shigella flexneri 2a str. 301	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	predicted DNA-binding transcriptional regulator [Escherichia coli K12]	sugar fermentation stimulation protein [Shigella flexneri 2a str. 301]
gi|30061706|ref|NP_835877.1| sugar fermentation stimulation protein [Shigella flexneri 2a str. 2457T]
gi|44888472|sp|Q83SL9|SFSA_SHIFL Sugar fermentation stimulation protein homolog
gi|24050349|gb|AAN41801.1| probable regulator for maltose metabolism [Shigella flexneri 2a str. 301]
gi|30039948|gb|AAP15682.1| probable regulator for maltose metabolism [Shigella flexneri 2a str. 2457T]
gi|1786343|gb|AAC73260.1|	153	144	11	gi|30061709|ref|NP_835880.1|	gi|30061709|ref|NP_835880.1|	0.980850676114783523767512217141749	87	844	844	1	0	1436	198215	Shigella flexneri 2a str. 2457T	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	fused glycosyl transferase and transpeptidase [Escherichia coli K12]	penicillin-binding protein 1b [Shigella flexneri 2a str. 2457T]
gi|56479613|ref|NP_706097.2| penicillin-binding protein 1b [Shigella flexneri 2a str. 301]
gi|75189246|ref|ZP_00702513.1| COG0744: Membrane carboxypeptidase (penicillin-binding protein) [Escherichia coli E24377A]
gi|75194361|ref|ZP_00704431.1| COG0744: Membrane carboxypeptidase (penicillin-binding protein) [Escherichia coli HS]
gi|75210474|ref|ZP_00710625.1| COG0744: Membrane carboxypeptidase (penicillin-binding protein) [Escherichia coli B171]
gi|75258860|ref|ZP_00730250.1| COG0744: Membrane carboxypeptidase (penicillin-binding protein) [Escherichia coli E22]
gi|110804204|ref|YP_687724.1| penicillin-binding protein 1B [Shigella flexneri 5 str. 8401]
gi|30039951|gb|AAP15685.1| peptidoglycan synthetase; penicillin-binding protein 1B [Shigella flexneri 2a str. 2457T]
gi|56383164|gb|AAN41804.2| peptidoglycan synthetase; penicillin-binding protein 1B [Shigella flexneri 2a str. 301]
gi|110613752|gb|ABF02419.1| penicillin-binding protein 1B [Shigella flexneri 5 str. 8401]
gi|1786344|gb|AAC73261.1|	37	30	4	gi|24111588|ref|NP_706098.1|	gi|24111588|ref|NP_706098.1|	0.980850676114783523767512217141749	91	747	747	1	0	1375	198214	Shigella flexneri 2a str. 301	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	ferrichrome outer membrane transporter [Escherichia coli K12]	outer membrane protein receptor for ferrichrome, colicin M, and phages T1, T5, and phi80 [Shigella flexneri 2a str. 301]
gi|30061710|ref|NP_835881.1| outer membrane protein receptor for ferrichrome, colicin M, and phages T1, T5, and phi80 [Shigella flexneri 2a str. 2457T]
gi|24050353|gb|AAN41805.1| outer membrane protein receptor for ferrichrome, colicin M, and phages T1, T5, and phi80 [Shigella flexneri 2a str. 301]
gi|30039952|gb|AAP15686.1| outer membrane protein receptor for ferrichrome, colicin M, and phages T1, T5, and phi80 [Shigella flexneri 2a str. 2457T]
gi|1786345|gb|AAC73262.1|	498	476	9	gi|75176503|ref|ZP_00696640.1|	gi|75176503|ref|ZP_00696640.1|	0.980850676114783523767512217141749	99	265	265	1	2e-148	527	344609	Shigella boydii BS512	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	iron-hydroxamate transporter subunit [Escherichia coli K12]	COG1120: ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Shigella boydii BS512]
gi|1786346|gb|AAC73263.1|	72	57	5	gi|83569733|ref|ZP_00921183.1|	gi|83569733|ref|ZP_00921183.1|	0.980850676114783523767512217141749	94	296	296	1	4e-160	567	358708	Shigella dysenteriae 1012	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	iron-hydroxamate transporter subunit [Escherichia coli K12]	COG0614: ABC-type Fe3+-hydroxamate transport system, periplasmic component [Shigella dysenteriae 1012]
gi|1786347|gb|AAC73264.1|	79	67	10	gi|24111591|ref|NP_706101.1|	gi|24111591|ref|NP_706101.1|	0.980850676114783523767512217141749	76	660	660	1	0	974	198214	Shigella flexneri 2a str. 301	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	fused iron-hydroxamate transporter subunits of ABC superfamily: membrane components [Escherichia coli K12]	ferrichrome-iron transport protein FhuB [Shigella flexneri 2a str. 301]
gi|30061713|ref|NP_835884.1| ferrichrome-iron transport protein FhuB [Shigella flexneri 2a str. 2457T]
gi|110804208|ref|YP_687728.1| hydroxamate-dependent iron uptake, cytoplasmic membrane component [Shigella flexneri 5 str. 8401]
gi|24050356|gb|AAN41808.1| ferrichrome-iron transport protein FhuB [Shigella flexneri 2a str. 301]
gi|30039955|gb|AAP15689.1| ferrichrome-iron transport protein FhuB [Shigella flexneri 2a str. 2457T]
gi|110613756|gb|ABF02423.1| hydroxamate-dependent iron uptake, cytoplasmic membrane component [Shigella flexneri 5 str. 8401]
gi|1786349|gb|AAC73265.1|	471	458	16	gi|74310775|ref|YP_309194.1|	gi|74310775|ref|YP_309194.1|	0.980850676114783523767512217141749	94	426	426	1	0	817	300269	Shigella sonnei Ss046	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	glutamate-1-semialdehyde aminotransferase (aminomutase) [Escherichia coli K12]	glutamate-1-semialdehyde aminotransferase (aminomutase) [Shigella sonnei Ss046]
gi|109892179|sp|Q3Z5K3|GSA_SHISS Glutamate-1-semialdehyde 2,1-aminomutase (GSA) (Glutamate-1-semialdehyde aminotransferase) (GSA-AT)
gi|73854252|gb|AAZ86959.1| glutamate-1-semialdehyde aminotransferase (aminomutase) [Shigella sonnei Ss046]
gi|1786350|gb|AAC73266.1|	69	56	5	gi|83569736|ref|ZP_00921186.1|	gi|83569736|ref|ZP_00921186.1|	0.980850676114783523767512217141749	79	473	473	1	0	714	358708	Shigella dysenteriae 1012	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	chloride channel, voltage-gated [Escherichia coli K12]	COG0038: Chloride channel protein EriC [Shigella dysenteriae 1012]
gi|1786351|gb|AAC73267.1|	496	483	8	gi|39546289|ref|NP_459209.2|	gi|39546289|ref|NP_459209.2|	0.924894897038167149339529796771127	99	114	114	1	3e-60	232	99287	Salmonella typhimurium LT2	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella	conserved protein [Escherichia coli K12]	hypothetical protein STM0204.S [Salmonella typhimurium LT2]
gi|1786352|gb|AAC73268.1|	217	212	6	gi|74310778|ref|YP_309197.1|	gi|74310778|ref|YP_309197.1|	0.980850676114783523767512217141749	86	207	207	1	4e-95	350	300269	Shigella sonnei Ss046	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	conserved inner membrane protein [Escherichia coli K12]	hypothetical protein SSO_0169 [Shigella sonnei Ss046]
gi|73854255|gb|AAZ86962.1| conserved hypothetical protein [Shigella sonnei Ss046]
gi|1786353|gb|AAC73269.1|	198	188	6	gi|110804213|ref|YP_687733.1|	gi|110804213|ref|YP_687733.1|	0.980850676114783523767512217141749	99	266	266	1	8e-149	529	373384	Shigella flexneri 5 str. 8401	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	vitamin B12 transporter subunit: periplasmic-binding component of ABC superfamily [Escherichia coli K12]	hypothetical protein SFV_0143 [Shigella flexneri 5 str. 8401]
gi|110613761|gb|ABF02428.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401]
gi|1786354|gb|AAC73270.1|	209	201	4	gi|82542759|ref|YP_406706.1|	gi|82542759|ref|YP_406706.1|	0.980850676114783523767512217141749	93	232	232	1	1e-115	418	300268	Shigella boydii Sb227	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	unknown [Escherichia coli K12]	hypothetical protein SBO_0148 [Shigella boydii Sb227]
gi|81244170|gb|ABB64878.1| conserved hypothetical protein [Shigella boydii Sb227]
gi|1786355|gb|AAC73271.1|	39	31	7	gi|30061720|ref|NP_835891.1|	gi|30061720|ref|NP_835891.1|	0.980850676114783523767512217141749	99	505	505	1	0	1026	198215	Shigella flexneri 2a str. 2457T	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	deoxyguanosine triphosphate triphosphohydrolase [Escherichia coli K12]	deoxyguanosinetriphosphate triphosphohydrolase [Shigella flexneri 2a str. 2457T]
gi|75194372|ref|ZP_00704442.1| COG0232: dGTP triphosphohydrolase [Escherichia coli HS]
gi|75230477|ref|ZP_00716958.1| COG0232: dGTP triphosphohydrolase [Escherichia coli B7A]
gi|83585477|ref|ZP_00924122.1| COG0232: dGTP triphosphohydrolase [Escherichia coli 101-1]
gi|110804215|ref|YP_687735.1| deoxyguanosine triphosphate triphosphohydrolase [Shigella flexneri 5 str. 8401]
gi|30039962|gb|AAP15696.1| deoxyguanosine triphosphate triphosphohydrolase [Shigella flexneri 2a str. 2457T]
gi|110613763|gb|ABF02430.1| deoxyguanosine triphosphate triphosphohydrolase [Shigella flexneri 5 str. 8401]
gi|1786356|gb|AAC73272.1|	287	273	7	gi|24111599|ref|NP_706109.1|	gi|24111599|ref|NP_706109.1|	0.980850676114783523767512217141749	87	474	474	1	0	793	198214	Shigella flexneri 2a str. 301	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	serine endoprotease (protease Do), membrane-associated [Escherichia coli K12]	periplasmic serine protease Do, heat shock protein HtrA [Shigella flexneri 2a str. 301]
gi|30061721|ref|NP_835892.1| periplasmic serine protease Do, heat shock protein HtrA [Shigella flexneri 2a str. 2457T]
gi|110804216|ref|YP_687736.1| periplasmic serine protease Do [Shigella flexneri 5 str. 8401]
gi|24050365|gb|AAN41816.1| periplasmic serine protease Do, heat shock protein HtrA [Shigella flexneri 2a str. 301]
gi|30039963|gb|AAP15697.1| periplasmic serine protease Do, heat shock protein HtrA [Shigella flexneri 2a str. 2457T]
gi|110613764|gb|ABF02431.1| periplasmic serine protease Do [Shigella flexneri 5 str. 8401]
gi|1786359|gb|AAC73274.1|	25	24	6	gi|16759202|ref|NP_454819.1|	gi|16759202|ref|NP_454819.1|	0.924894897038167149339529796771127	95	128	128	1	3e-65	249	220341	Salmonella enterica subsp. enterica serovar Typhi str. CT18	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella	conserved protein [Escherichia coli K12]	hypothetical protein STY0233 [Salmonella enterica subsp. enterica serovar Typhi str. CT18]
gi|16763601|ref|NP_459216.1| putative cytoplasmic protein [Salmonella typhimurium LT2]
gi|29140752|ref|NP_804094.1| hypothetical protein t0212 [Salmonella enterica subsp. enterica serovar Typhi Ty2]
gi|56412484|ref|YP_149559.1| hypothetical protein SPA0217 [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150]
gi|62178781|ref|YP_215198.1| putative cytoplasmic protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67]
gi|51316733|sp|Q7ANK1|YAEH_SALTI UPF0325 protein yaeH
gi|51316736|sp|Q7CR64|YAEH_SALTY Hypothetical UPF0325 protein yaeH
gi|62287943|sp|Q5PD51|YAEH_SALPA Hypothetical UPF0325 protein yaeH
gi|68053013|sp|Q57T44|YAEH_SALCH UPF0325 protein yaeH
gi|25340052|pir||AE0528 conserved hypothetical protein STY0233 [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18)
gi|16418715|gb|AAL19175.1| putative cytoplasmic protein [Salmonella typhimurium LT2]
gi|16501492|emb|CAD01365.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Typhi]
gi|29136376|gb|AAO67943.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Typhi Ty2]
gi|56126741|gb|AAV76247.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150]
gi|62126414|gb|AAX64117.1| putative cytoplasmic protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67]
gi|1786362|gb|AAC73277.1|	251	245	16	gi|75176489|ref|ZP_00696626.1|	gi|75176489|ref|ZP_00696626.1|	0.980850676114783523767512217141749	93	274	274	1	8e-143	509	344609	Shigella boydii BS512	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase [Escherichia coli K12]	COG2171: Tetrahydrodipicolinate N-succinyltransferase [Shigella boydii BS512]
gi|1786363|gb|AAC73278.1|	206	194	10	gi|75176488|ref|ZP_00696625.1|	gi|75176488|ref|ZP_00696625.1|	0.980850676114783523767512217141749	96	890	890	1	0	1720	344609	Shigella boydii BS512	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	uridylyltransferase [Escherichia coli K12]	COG2844: UTP:GlnB (protein PII) uridylyltransferase [Shigella boydii BS512]
gi|1786364|gb|AAC73279.1|	500	488	3	gi|74310788|ref|YP_309207.1|	gi|74310788|ref|YP_309207.1|	0.980850676114783523767512217141749	99	264	264	1	6e-151	536	300269	Shigella sonnei Ss046	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	methionine aminopeptidase [Escherichia coli K12]	methionine aminopeptidase [Shigella sonnei Ss046]
gi|73854265|gb|AAZ86972.1| methionine aminopeptidase [Shigella sonnei Ss046]
gi|1786365|gb|AAC73280.1|	500	491	16	gi|110804221|ref|YP_687741.1|	gi|110804221|ref|YP_687741.1|	0.980850676114783523767512217141749	99	241	241	1	1e-133	478	373384	Shigella flexneri 5 str. 8401	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	30S ribosomal subunit protein S2 [Escherichia coli K12]	30S ribosomal subunit protein S2 [Shigella flexneri 5 str. 8401]
gi|110613769|gb|ABF02436.1| 30S ribosomal subunit protein S2 [Shigella flexneri 5 str. 8401]
gi|1786366|gb|AAC73281.1|	261	255	5	gi|83569752|ref|ZP_00921202.1|	gi|83569752|ref|ZP_00921202.1|	0.980850676114783523767512217141749	93	283	283	1	4e-141	503	358708	Shigella dysenteriae 1012	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	protein chain elongation factor EF-Ts [Escherichia coli K12]	COG0264: Translation elongation factor Ts [Shigella dysenteriae 1012]
gi|1786367|gb|AAC73282.1|	471	464	10	gi|82775561|ref|YP_401908.1|	gi|82775561|ref|YP_401908.1|	0.980850676114783523767512217141749	92	241	241	1	5e-120	433	300267	Shigella dysenteriae Sd197	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	uridylate kinase [Escherichia coli K12]	uridylate kinase [Shigella dysenteriae Sd197]
gi|81239709|gb|ABB60419.1| uridylate kinase [Shigella dysenteriae Sd197]
gi|1786368|gb|AAC73283.1|	464	460	2	gi|16759209|ref|NP_454826.1|	gi|16759209|ref|NP_454826.1|	0.924894897038167149339529796771127	86	185	185	1	3e-83	310	220341	Salmonella enterica subsp. enterica serovar Typhi str. CT18	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella	ribosome recycling factor [Escherichia coli K12]	ribosome releasing factor [Salmonella enterica subsp. enterica serovar Typhi str. CT18]
gi|16763609|ref|NP_459224.1| ribosome releasing factor [Salmonella typhimurium LT2]
gi|29140759|ref|NP_804101.1| ribosome releasing factor [Salmonella enterica subsp. enterica serovar Typhi Ty2]
gi|62178789|ref|YP_215206.1| ribosome releasing factor [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67]
gi|54039297|sp|P66739|RRF_SALTI Ribosome recycling factor (Ribosome-releasing factor) (RRF)
gi|54042005|sp|P66738|RRF_SALTY Ribosome recycling factor (Ribosome-releasing factor) (RRF)
gi|75484798|sp|Q57T36|RRF_SALCH Ribosome recycling factor (Ribosome-releasing factor) (RRF)
gi|25299716|pir||AE0529 ribosome recycling factor [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18)
gi|16418724|gb|AAL19183.1| ribosome releasing factor [Salmonella typhimurium LT2]
gi|16501500|emb|CAD08677.1| ribosome recycling factor [Salmonella enterica subsp. enterica serovar Typhi]
gi|29136383|gb|AAO67950.1| ribosome recycling factor [Salmonella enterica subsp. enterica serovar Typhi Ty2]
gi|62126422|gb|AAX64125.1| ribosome releasing factor [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67]
gi|1786369|gb|AAC73284.1|	292	281	4	gi|83569755|ref|ZP_00921205.1|	gi|83569755|ref|ZP_00921205.1|	0.980850676114783523767512217141749	99	398	398	1	0	780	358708	Shigella dysenteriae 1012	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	1-deoxy-D-xylulose 5-phosphate reductoisomerase [Escherichia coli K12]	COG0743: 1-deoxy-D-xylulose 5-phosphate reductoisomerase [Shigella dysenteriae 1012]
gi|1786371|gb|AAC73285.1|	500	491	5	gi|74310794|ref|YP_309213.1|	gi|74310794|ref|YP_309213.1|	0.980850676114783523767512217141749	99	253	253	1	5e-144	513	300269	Shigella sonnei Ss046	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	undecaprenyl pyrophosphate synthase [Escherichia coli K12]	hypothetical protein SSO_0186 [Shigella sonnei Ss046]
gi|73854271|gb|AAZ86978.1| conserved hypothetical protein [Shigella sonnei Ss046]
gi|1786373|gb|AAC73287.1|	159	151	5	gi|74310796|ref|YP_309215.1|	gi|74310796|ref|YP_309215.1|	0.980850676114783523767512217141749	93	450	450	1	0	832	300269	Shigella sonnei Ss046	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	zinc metallopeptidase [Escherichia coli K12]	hypothetical protein SSO_0188 [Shigella sonnei Ss046]
gi|73854273|gb|AAZ86980.1| conserved hypothetical protein [Shigella sonnei Ss046]
gi|1786374|gb|AAC73288.1|	229	223	5	gi|82775567|ref|YP_401914.1|	gi|82775567|ref|YP_401914.1|	0.980850676114783523767512217141749	99	810	810	1	0	1651	300267	Shigella dysenteriae Sd197	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	conserved protein [Escherichia coli K12]	hypothetical protein SDY_0193 [Shigella dysenteriae Sd197]
gi|81239715|gb|ABB60425.1| conserved hypothetical protein [Shigella dysenteriae Sd197]
gi|1786375|gb|AAC73289.1|	78	74	1	gi|16759215|ref|NP_454832.1|	gi|16759215|ref|NP_454832.1|	0.924894897038167149339529796771127	81	161	161	1	4e-66	252	220341	Salmonella enterica subsp. enterica serovar Typhi str. CT18	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella	periplasmic chaperone [Escherichia coli K12]	outer membrane protein OmpH precursor [Salmonella enterica subsp. enterica serovar Typhi str. CT18]
gi|16763615|ref|NP_459230.1| outer membrane protein H precursor [Salmonella typhimurium LT2]
gi|29140765|ref|NP_804107.1| outer membrane protein OmpH precursor [Salmonella enterica subsp. enterica serovar Typhi Ty2]
gi|56412498|ref|YP_149573.1| outer membrane protein OmpH precursor [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150]
gi|62178795|ref|YP_215212.1| histone-like protein, located in outer membrane [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67]
gi|60392860|sp|P0A1Z2|SKP_SALTY Chaperone protein skp precursor (Outer membrane protein ompH) (Cationic 16 kDa outer membrane protein)
gi|60392861|sp|P0A1Z3|SKP_SALTI Chaperone protein skp precursor
gi|75484794|sp|Q57T30|SKP_SALCH Chaperone protein skp precursor
gi|81359598|sp|Q5PD64|SKP_SALPA Chaperone protein skp precursor
gi|25294339|pir||AC0530 outer membrane protein OmpH precursor ompH [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18)
gi|154210|gb|AAA27170.1| cationic outer membrane protein precursor (gtg start codon)
gi|16418730|gb|AAL19189.1| histone-like protein, located in outer membrane [Salmonella typhimurium LT2]
gi|16501506|emb|CAD08683.1| outer membrane protein OmpH precursor [Salmonella enterica subsp. enterica serovar Typhi]
gi|29136389|gb|AAO67956.1| outer membrane protein OmpH precursor [Salmonella enterica subsp. enterica serovar Typhi Ty2]
gi|56126755|gb|AAV76261.1| outer membrane protein OmpH precursor [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150]
gi|62126428|gb|AAX64131.1| histone-like protein, located in outer membrane [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67]
gi|1786376|gb|AAC73290.1|	385	376	4	gi|83568993|ref|ZP_00920457.1|	gi|83568993|ref|ZP_00920457.1|	0.980850676114783523767512217141749	96	341	341	1	0	656	358708	Shigella dysenteriae 1012	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	UDP-3-O-(3-hydroxymyristoyl)-glucosamine N-acyltransferase [Escherichia coli K12]	COG1044: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [Shigella dysenteriae 1012]
gi|1786377|gb|AAC73291.1|	456	447	9	gi|16759217|ref|NP_454834.1|	gi|16759217|ref|NP_454834.1|	0.924894897038167149339529796771127	99	151	151	1	3e-81	302	220341	Salmonella enterica subsp. enterica serovar Typhi str. CT18	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Salmonella	(3R)-hydroxymyristol acyl carrier protein dehydratase [Escherichia coli K12]	(3R)-hydroxymyristoyl ACP dehydratase [Salmonella enterica subsp. enterica serovar Typhi str. CT18]
gi|16763617|ref|NP_459232.1| (3R)-hydroxymyristoyl ACP dehydratase [Salmonella typhimurium LT2]
gi|29140767|ref|NP_804109.1| (3R)-hydroxymyristoyl ACP dehydratase [Salmonella enterica subsp. enterica serovar Typhi Ty2]
gi|56412500|ref|YP_149575.1| (3R)-hydroxymyristoyl ACP dehydratase [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150]
gi|60392271|sp|P0A1H9|FABZ_SALTY (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase ((3R)-hydroxymyristoyl ACP dehydrase)
gi|60392272|sp|P0A1I0|FABZ_SALTI (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase ((3R)-hydroxymyristoyl ACP dehydrase)
gi|62286728|sp|Q5PD74|FABZ_SALPA (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase ((3R)-hydroxymyristoyl ACP dehydrase)
gi|91206648|sp|Q57T28|FABZ_SALCH (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase ((3R)-hydroxymyristoyl ACP dehydrase)
gi|25319418|pir||AE0530 (3R)-hydroxymyristol acyl carrier protein dehydrase [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18)
gi|16418732|gb|AAL19191.1| (3R)-hydroxymyristol acyl carrier protein dehydratase [Salmonella typhimurium LT2]
gi|16501508|emb|CAD08685.1| (3R)-hydroxymyristol acyl carrier protein dehydrase [Salmonella enterica subsp. enterica serovar Typhi]
gi|29136391|gb|AAO67958.1| (3R)-hydroxymyristol acyl carrier protein dehydrase [Salmonella enterica subsp. enterica serovar Typhi Ty2]
gi|56126757|gb|AAV76263.1| (3R)-hydroxymyristol acyl carrier protein dehydrase [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150]
gi|1786378|gb|AAC73292.1|	451	442	5	gi|110804233|ref|YP_687753.1|	gi|110804233|ref|YP_687753.1|	0.980850676114783523767512217141749	99	262	262	1	3e-148	527	373384	Shigella flexneri 5 str. 8401	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	UDP-N-acetylglucosamine acetyltransferase [Escherichia coli K12]	UDP-N-acetylglucosamine acetyltransferase [Shigella flexneri 5 str. 8401]
gi|110613781|gb|ABF02448.1| UDP-N-acetylglucosamine acetyltransferase [Shigella flexneri 5 str. 8401]
gi|1786379|gb|AAC73293.1|	291	281	8	gi|75176473|ref|ZP_00696610.1|	gi|75176473|ref|ZP_00696610.1|	0.980850676114783523767512217141749	96	382	368	0.96335078534031413612565445026178	0	710	344609	Shigella boydii BS512	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	tetraacyldisaccharide-1-P synthase [Escherichia coli K12]	COG0763: Lipid A disaccharide synthetase [Shigella boydii BS512]
gi|82542781|ref|YP_406728.1| tetraacyldisaccharide-1-P [Shigella boydii Sb227]
gi|81244192|gb|ABB64900.1| tetraacyldisaccharide-1-P [Shigella boydii Sb227]
gi|1786380|gb|AAC73294.1|	453	445	4	gi|24111618|ref|NP_706128.1|	gi|24111618|ref|NP_706128.1|	0.980850676114783523767512217141749	99	198	198	1	2e-107	391	198214	Shigella flexneri 2a str. 301	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	ribonuclease HII, degrades RNA of DNA-RNA hybrids [Escherichia coli K12]	ribonuclease HII [Shigella flexneri 2a str. 301]
gi|30061740|ref|NP_835911.1| ribonuclease HII [Shigella flexneri 2a str. 2457T]
gi|82775573|ref|YP_401920.1| RNAse HII [Shigella dysenteriae Sd197]
gi|110804235|ref|YP_687755.1| RNAse HII [Shigella flexneri 5 str. 8401]
gi|39932374|sp|Q83MN1|RNH2_SHIFL Ribonuclease HII (RNase HII)
gi|97189271|sp|Q32JS6|RNH2_SHIDS Ribonuclease HII (RNase HII)
gi|24050387|gb|AAN41835.1| RNAse HII [Shigella flexneri 2a str. 301]
gi|30039982|gb|AAP15716.1| RNAse HII [Shigella flexneri 2a str. 2457T]
gi|81239721|gb|ABB60431.1| RNAse HII [Shigella dysenteriae Sd197]
gi|110613783|gb|ABF02450.1| RNAse HII [Shigella flexneri 5 str. 8401]
gi|1786381|gb|AAC73295.1|	355	346	17	gi|74310804|ref|YP_309223.1|	gi|74310804|ref|YP_309223.1|	0.980850676114783523767512217141749	98	1160	1160	1	0	2277	300269	Shigella sonnei Ss046	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	DNA polymerase III alpha subunit [Escherichia coli K12]	DNA polymerase III alpha subunit [Shigella sonnei Ss046]
gi|73854281|gb|AAZ86988.1| DNA polymerase III alpha subunit [Shigella sonnei Ss046]
gi|1786382|gb|AAC73296.1|	404	390	10	gi|74310805|ref|YP_309224.1|	gi|74310805|ref|YP_309224.1|	0.980850676114783523767512217141749	89	319	319	1	8e-157	556	300269	Shigella sonnei Ss046	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	acetyl-CoA carboxylase, carboxytransferase, alpha subunit [Escherichia coli K12]	acetylCoA carboxylase, carboxytransferase component, alpha subunit [Shigella sonnei Ss046]
gi|88909567|sp|Q3Z5H3|ACCA_SHISS Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha (Acetyl-CoA carboxylase carboxyltransferase subunit alpha) (ACCase subunit alpha)
gi|73854282|gb|AAZ86989.1| acetylCoA carboxylase, carboxytransferase component, alpha subunit [Shigella sonnei Ss046]
gi|1786384|gb|AAC73297.1|	126	98	9	gi|74310807|ref|YP_309226.1|	gi|74310807|ref|YP_309226.1|	0.980850676114783523767512217141749	99	713	713	1	0	1455	300269	Shigella sonnei Ss046	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	lysine decarboxylase 2, constitutive [Escherichia coli K12]	lysine decarboxylase 2, constitutive [Shigella sonnei Ss046]
gi|73854284|gb|AAZ86991.1| lysine decarboxylase 2, constitutive [Shigella sonnei Ss046]
gi|1786386|gb|AAC73299.1|	136	125	6	gi|83568984|ref|ZP_00920448.1|	gi|83568984|ref|ZP_00920448.1|	0.980850676114783523767512217141749	85	432	432	1	0	740	358708	Shigella dysenteriae 1012	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	tRNA(Ile)-lysidine synthetase [Escherichia coli K12]	COG0037: Predicted ATPase of the PP-loop superfamily implicated in cell cycle control [Shigella dysenteriae 1012]
gi|1786388|gb|AAC73301.1|	120	113	5	gi|74310812|ref|YP_309231.1|	gi|74310812|ref|YP_309231.1|	0.980850676114783523767512217141749	98	181	181	1	4e-100	366	300269	Shigella sonnei Ss046	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	conserved protein [Escherichia coli K12]	hypothetical protein SSO_0204 [Shigella sonnei Ss046]
gi|73854289|gb|AAZ86996.1| conserved hypothetical protein [Shigella sonnei Ss046]
gi|1786389|gb|AAC73302.1|	222	212	4	gi|75176463|ref|ZP_00696600.1|	gi|75176463|ref|ZP_00696600.1|	0.980850676114783523767512217141749	97	140	140	1	2e-69	263	344609	Shigella boydii BS512	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	conserved protein [Escherichia coli K12]	COG1186: Protein chain release factor B [Shigella boydii BS512]
gi|75189287|ref|ZP_00702554.1| COG1186: Protein chain release factor B [Escherichia coli E24377A]
gi|75194402|ref|ZP_00704472.1| COG1186: Protein chain release factor B [Escherichia coli HS]
gi|75210515|ref|ZP_00710666.1| COG1186: Protein chain release factor B [Escherichia coli B171]
gi|75229824|ref|ZP_00716351.1| COG1186: Protein chain release factor B [Escherichia coli B7A]
gi|75238895|ref|ZP_00722877.1| COG1186: Protein chain release factor B [Escherichia coli E110019]
gi|75258817|ref|ZP_00730207.1| COG1186: Protein chain release factor B [Escherichia coli E22]
gi|75512204|ref|ZP_00734776.1| COG1186: Protein chain release factor B [Escherichia coli 53638]
gi|83568980|ref|ZP_00920444.1| COG1186: Protein chain release factor B [Shigella dysenteriae 1012]
gi|1786390|gb|AAC73303.1|	25	17	5	gi|74310813|ref|YP_309232.1|	gi|74310813|ref|YP_309232.1|	0.980850676114783523767512217141749	98	236	236	1	2e-132	474	300269	Shigella sonnei Ss046	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	lipoprotein involved with copper homeostasis and adhesion [Escherichia coli K12]	copper homeostasis protein [Shigella sonnei Ss046]
gi|75189288|ref|ZP_00702555.1| COG3015: Uncharacterized lipoprotein NlpE involved in copper resistance [Escherichia coli E24377A]
gi|75210516|ref|ZP_00710667.1| COG3015: Uncharacterized lipoprotein NlpE involved in copper resistance [Escherichia coli B171]
gi|75238896|ref|ZP_00722878.1| COG3015: Uncharacterized lipoprotein NlpE involved in copper resistance [Escherichia coli E110019]
gi|75258816|ref|ZP_00730206.1| COG3015: Uncharacterized lipoprotein NlpE involved in copper resistance [Escherichia coli E22]
gi|73854290|gb|AAZ86997.1| copper homeostasis protein [Shigella sonnei Ss046]
gi|1786392|gb|AAC73305.1|	329	315	7	gi|83568977|ref|ZP_00920441.1|	gi|83568977|ref|ZP_00920441.1|	0.980850676114783523767512217141749	99	572	572	1	0	1121	358708	Shigella dysenteriae 1012	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	prolyl-tRNA synthetase [Escherichia coli K12]	COG0442: Prolyl-tRNA synthetase [Shigella dysenteriae 1012]
gi|1786393|gb|AAC73306.1|	130	122	8	gi|82775587|ref|YP_401934.1|	gi|82775587|ref|YP_401934.1|	0.980850676114783523767512217141749	93	235	235	1	7e-124	446	300267	Shigella dysenteriae Sd197	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	conserved protein [Escherichia coli K12]	hypothetical protein SDY_0214 [Shigella dysenteriae Sd197]
gi|81239735|gb|ABB60445.1| conserved hypothetical protein [Shigella dysenteriae Sd197]
gi|1786394|gb|AAC73307.1|	17	12	3	gi|24111632|ref|NP_706142.1|	gi|24111632|ref|NP_706142.1|	0.980850676114783523767512217141749	85	134	134	1	6e-58	225	198214	Shigella flexneri 2a str. 301	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	predicted outer membrane protein, signal [Escherichia coli K12]	exopolysaccharide synthesis regulator [Shigella flexneri 2a str. 301]
gi|30061753|ref|NP_835924.1| exopolysaccharide synthesis regulator [Shigella flexneri 2a str. 2457T]
gi|110804248|ref|YP_687768.1| regulator in colanic acid synthesis [Shigella flexneri 5 str. 8401]
gi|24050403|gb|AAN41849.1| exopolysaccharide synthesis regulator [Shigella flexneri 2a str. 301]
gi|30039995|gb|AAP15729.1| exopolysaccharide synthesis regulator [Shigella flexneri 2a str. 2457T]
gi|110613796|gb|ABF02463.1| regulator in colanic acid synthesis [Shigella flexneri 5 str. 8401]
gi|1786396|gb|AAC73308.1|	467	454	14	gi|24111633|ref|NP_706143.1|	gi|24111633|ref|NP_706143.1|	0.980850676114783523767512217141749	94	271	271	1	2e-141	505	198214	Shigella flexneri 2a str. 301	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	DL-methionine transporter subunit [Escherichia coli K12]	putative lipoprotein [Shigella flexneri 2a str. 301]
gi|30061754|ref|NP_835925.1| putative lipoprotein [Shigella flexneri 2a str. 2457T]
gi|74310818|ref|YP_309237.1| putative lipoprotein [Shigella sonnei Ss046]
gi|75176457|ref|ZP_00696594.1| COG1464: ABC-type metal ion transport system, periplasmic component/surface antigen [Shigella boydii BS512]
gi|75189295|ref|ZP_00702562.1| COG1464: ABC-type metal ion transport system, periplasmic component/surface antigen [Escherichia coli E24377A]
gi|75194409|ref|ZP_00704479.1| COG1464: ABC-type metal ion transport system, periplasmic component/surface antigen [Escherichia coli HS]
gi|75210522|ref|ZP_00710673.1| COG1464: ABC-type metal ion transport system, periplasmic component/surface antigen [Escherichia coli B171]
gi|75229817|ref|ZP_00716344.1| COG1464: ABC-type metal ion transport system, periplasmic component/surface antigen [Escherichia coli B7A]
gi|75238902|ref|ZP_00722884.1| COG1464: ABC-type metal ion transport system, periplasmic component/surface antigen [Escherichia coli E110019]
gi|75258809|ref|ZP_00730199.1| COG1464: ABC-type metal ion transport system, periplasmic component/surface antigen [Escherichia coli E22]
gi|82542796|ref|YP_406743.1| putative lipoprotein [Shigella boydii Sb227]
gi|83584735|ref|ZP_00923399.1| COG1464: ABC-type metal ion transport system, periplasmic component/surface antigen [Escherichia coli 101-1]
gi|110804249|ref|YP_687769.1| putative lipoprotein [Shigella flexneri 5 str. 8401]
gi|24050404|gb|AAN41850.1| putative lipoprotein [Shigella flexneri 2a str. 301]
gi|30039996|gb|AAP15730.1| putative lipoprotein [Shigella flexneri 2a str. 2457T]
gi|73854295|gb|AAZ87002.1| putative lipoprotein [Shigella sonnei Ss046]
gi|81244207|gb|ABB64915.1| putative lipoprotein [Shigella boydii Sb227]
gi|110613797|gb|ABF02464.1| putative lipoprotein [Shigella flexneri 5 str. 8401]
gi|1786397|gb|AAC73309.1|	415	403	14	gi|82775590|ref|YP_401937.1|	gi|82775590|ref|YP_401937.1|	0.980850676114783523767512217141749	81	217	217	1	1e-88	328	300267	Shigella dysenteriae Sd197	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	DL-methionine transporter subunit [Escherichia coli K12]	putative transport system permease protein [Shigella dysenteriae Sd197]
gi|81239738|gb|ABB60448.1| putative transport system permease protein [Shigella dysenteriae Sd197]
gi|1786398|gb|AAC73310.1|	462	459	8	gi|82775591|ref|YP_401938.1|	gi|82775591|ref|YP_401938.1|	0.980850676114783523767512217141749	99	343	343	1	0	671	300267	Shigella dysenteriae Sd197	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	DL-methionine transporter subunit [Escherichia coli K12]	ATP-binding component of a transporter [Shigella dysenteriae Sd197]
gi|81239739|gb|ABB60449.1| ATP-binding component of a transporter [Shigella dysenteriae Sd197]
gi|1786399|gb|AAC73311.1|	272	263	6	gi|82542799|ref|YP_406746.1|	gi|82542799|ref|YP_406746.1|	0.980850676114783523767512217141749	98	191	179	0.937172774869109947643979057591623	4e-100	366	300268	Shigella boydii Sb227	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	D,D-heptose 1,7-bisphosphate phosphatase [Escherichia coli K12]	putative phosphatase [Shigella boydii Sb227]
gi|81244210|gb|ABB64918.1| putative phosphatase [Shigella boydii Sb227]
gi|1786400|gb|AAC73312.1|	472	448	9	gi|74310822|ref|YP_309241.1|	gi|74310822|ref|YP_309241.1|	0.980850676114783523767512217141749	99	267	267	1	1e-146	522	300269	Shigella sonnei Ss046	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	2,5-diketo-D-gluconate reductase B [Escherichia coli K12]	putative aldose reductase [Shigella sonnei Ss046]
gi|83570292|ref|ZP_00921738.1| COG0656: Aldo/keto reductases, related to diketogulonate reductase [Shigella dysenteriae 1012]
gi|73854299|gb|AAZ87006.1| putative aldose reductase [Shigella sonnei Ss046]
gi|1786401|gb|AAC73313.1|	500	487	10	gi|74310823|ref|YP_309242.1|	gi|74310823|ref|YP_309242.1|	0.980850676114783523767512217141749	99	304	304	1	7e-165	582	300269	Shigella sonnei Ss046	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	predicted DNA-binding transcriptional regulator [Escherichia coli K12]	putative transcriptional regulator LYSR-type [Shigella sonnei Ss046]
gi|83586289|ref|ZP_00924924.1| COG0583: Transcriptional regulator [Escherichia coli 101-1]
gi|73854300|gb|AAZ87007.1| putative transcriptional regulator LYSR-type [Shigella sonnei Ss046]
gi|1786403|gb|AAC73314.1|	57	54	9	gi|82775595|ref|YP_401942.1|	gi|82775595|ref|YP_401942.1|	0.980850676114783523767512217141749	99	266	266	1	8e-151	535	300267	Shigella dysenteriae Sd197	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	conserved protein [Escherichia coli K12]	hypothetical protein SDY_0228 [Shigella dysenteriae Sd197]
gi|81239743|gb|ABB60453.1| conserved hypothetical protein [Shigella dysenteriae Sd197]
gi|1786404|gb|AAC73315.1|	89	79	6	gi|74310825|ref|YP_309244.1|	gi|74310825|ref|YP_309244.1|	0.980850676114783523767512217141749	96	207	207	1	4e-109	396	300269	Shigella sonnei Ss046	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	predicted S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli K12]	putative biotin synthesis protein [Shigella sonnei Ss046]
gi|75176774|ref|ZP_00696890.1| COG0500: SAM-dependent methyltransferases [Shigella boydii BS512]
gi|73854302|gb|AAZ87009.1| putative biotin synthesis protein [Shigella sonnei Ss046]
gi|1786405|gb|AAC73316.1|	159	155	6	gi|75176775|ref|ZP_00696891.1|	gi|75176775|ref|ZP_00696891.1|	0.980850676114783523767512217141749	99	452	452	1	0	890	344609	Shigella boydii BS512	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	predicted membrane-bound lytic murein transglycosylase D [Escherichia coli K12]	COG0741: Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) [Shigella boydii BS512]
gi|82542804|ref|YP_406751.1| transcriptional regulator for nitrite reductase [Shigella boydii Sb227]
gi|81244215|gb|ABB64923.1| transcriptional regulator for nitrite reductase [Shigella boydii Sb227]
gi|1786406|gb|AAC73317.1|	315	310	3	gi|74310827|ref|YP_309246.1|	gi|74310827|ref|YP_309246.1|	0.980850676114783523767512217141749	99	251	251	1	9e-146	518	300269	Shigella sonnei Ss046	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	predicted hydroxyacylglutathione hydrolase [Escherichia coli K12]	probable hydroxyacylglutathione hydrolase [Shigella sonnei Ss046]
gi|73854304|gb|AAZ87011.1| probable hydroxyacylglutathione hydrolase [Shigella sonnei Ss046]
gi|1786408|gb|AAC73319.1|	447	412	4	gi|24111645|ref|NP_706155.1|	gi|24111645|ref|NP_706155.1|	0.980850676114783523767512217141749	100	155	155	1	2e-89	329	198214	Shigella flexneri 2a str. 301	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	ribonuclease HI, degrades RNA of DNA-RNA hybrids [Escherichia coli K12]	ribonuclease H [Shigella flexneri 2a str. 301]
gi|24050418|gb|AAN41862.1| RNase HI [Shigella flexneri 2a str. 301]
gi|1786409|gb|AAC73320.1|	339	328	6	gi|30061767|ref|NP_835938.1|	gi|30061767|ref|NP_835938.1|	0.980850676114783523767512217141749	97	243	243	1	5e-132	473	198215	Shigella flexneri 2a str. 2457T	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	DNA polymerase III epsilon subunit [Escherichia coli K12]	DNA polymerase III subunit epsilon [Shigella flexneri 2a str. 2457T]
gi|56479626|ref|NP_706156.2| DNA polymerase III subunit epsilon [Shigella flexneri 2a str. 301]
gi|30040009|gb|AAP15743.1| DNA polymerase III, epsilon subunit [Shigella flexneri 2a str. 2457T]
gi|56383177|gb|AAN41863.2| DNA polymerase III, epsilon subunit [Shigella flexneri 2a str. 301]
gi|1786410|gb|AAC73321.1|	5	1	1	gi|74310831|ref|YP_309250.1|	gi|74310831|ref|YP_309250.1|	0.980850676114783523767512217141749	90	261	261	1	6e-133	476	300269	Shigella sonnei Ss046	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	predicted aminopeptidase [Escherichia coli K12]	putative aminopeptidase [Shigella sonnei Ss046]
gi|73854308|gb|AAZ87015.1| putative aminopeptidase [Shigella sonnei Ss046]
gi|1786412|gb|AAC73323.1|	204	187	7	gi|30061838|ref|NP_836009.1|	gi|30061838|ref|NP_836009.1|	0.980850676114783523767512217141749	98	256	256	1	2e-147	524	198215	Shigella flexneri 2a str. 2457T	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	predicted C-N hydrolase family amidase, NAD(P)-binding [Escherichia coli K12]	putative EC 3.5. amidase-type enzyme [Shigella flexneri 2a str. 2457T]
gi|56479635|ref|NP_706222.2| putative EC 3.5. amidase-type enzyme [Shigella flexneri 2a str. 301]
gi|30040082|gb|AAP15815.1| putative amidase-type enzyme [Shigella flexneri 2a str. 2457T]
gi|56383186|gb|AAN41929.2| putative EC 3.5. amidase-type enzyme [Shigella flexneri 2a str. 301]
gi|1786413|gb|AAC73324.1|	13	9	5	gi|74310862|ref|YP_309281.1|	gi|74310862|ref|YP_309281.1|	0.980850676114783523767512217141749	90	157	157	1	1e-77	290	300269	Shigella sonnei Ss046	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	inhibitor of vertebrate C-lysozyme [Escherichia coli K12]	hypothetical protein SSO_0262 [Shigella sonnei Ss046]
gi|73854339|gb|AAZ87046.1| conserved hypothetical protein [Shigella sonnei Ss046]
gi|1786416|gb|AAC73326.1|	301	294	11	gi|75176783|ref|ZP_00696899.1|	gi|75176783|ref|ZP_00696899.1|	0.980850676114783523767512217141749	100	192	192	1	6e-105	382	344609	Shigella boydii BS512	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	D-sedoheptulose 7-phosphate isomerase [Escherichia coli K12]	COG0279: Phosphoheptose isomerase [Shigella boydii BS512]
gi|75189329|ref|ZP_00702596.1| COG0279: Phosphoheptose isomerase [Escherichia coli E24377A]
gi|75194443|ref|ZP_00704513.1| COG0279: Phosphoheptose isomerase [Escherichia coli HS]
gi|75211208|ref|ZP_00711315.1| COG0279: Phosphoheptose isomerase [Escherichia coli B171]
gi|75231176|ref|ZP_00717598.1| COG0279: Phosphoheptose isomerase [Escherichia coli B7A]
gi|75237317|ref|ZP_00721364.1| COG0279: Phosphoheptose isomerase [Escherichia coli E110019]
gi|75241703|ref|ZP_00725540.1| COG0279: Phosphoheptose isomerase [Escherichia coli F11]
gi|75258773|ref|ZP_00730163.1| COG0279: Phosphoheptose isomerase [Escherichia coli E22]
gi|75513629|ref|ZP_00736020.1| COG0279: Phosphoheptose isomerase [Escherichia coli 53638]
gi|83570263|ref|ZP_00921709.1| COG0279: Phosphoheptose isomerase [Shigella dysenteriae 1012]
gi|83586303|ref|ZP_00924938.1| COG0279: Phosphoheptose isomerase [Escherichia coli 101-1]
gi|1552792|gb|AAB08644.1| hypothetical [Escherichia coli]
gi|1786417|gb|AAC73327.1|	140	135	5	gi|30061842|ref|NP_836013.1|	gi|30061842|ref|NP_836013.1|	0.980850676114783523767512217141749	99	255	255	1	1e-151	538	198215	Shigella flexneri 2a str. 2457T	Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;Enterobacteriaceae;Shigella	predicted amidotransfease [Escherichia coli K12]	putative amidotransfe