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Items 1 - 20 of 134
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1:

'Gene shaving' as a method for identifying distinct sets of genes with similar expression patterns.

Hastie T, Tibshirani R, Eisen MB, Alizadeh A, Levy R, Staudt L, Chan WC, Botstein D, Brown P.

Genome Biol. 2000;1(2):RESEARCH0003. Epub 2000 Aug 4.

PMID: 11178228 [PubMed - indexed for MEDLINE]

2:

Clustering of the SOM easily reveals distinct gene expression patterns: results of a reanalysis of lymphoma study.

Wang J, Delabie J, Aasheim H, Smeland E, Myklebost O.

BMC Bioinformatics. 2002 Nov 24;3:36. Epub 2002 Nov 24.

PMID: 12445336 [PubMed - indexed for MEDLINE]

3:

Mining gene expression data by interpreting principal components.

Roden JC, King BW, Trout D, Mortazavi A, Wold BJ, Hart CE.

BMC Bioinformatics. 2006 Apr 7;7:194.

PMID: 16600052 [PubMed - indexed for MEDLINE]

4:

Cluster stability scores for microarray data in cancer studies.

Smolkin M, Ghosh D.

BMC Bioinformatics. 2003 Sep 6;4:36. Epub 2003 Sep 6.

PMID: 12959646 [PubMed - indexed for MEDLINE]

5:

The use of molecular profiling to predict survival after chemotherapy for diffuse large-B-cell lymphoma.

Rosenwald A, Wright G, Chan WC, Connors JM, Campo E, Fisher RI, Gascoyne RD, Muller-Hermelink HK, Smeland EB, Giltnane JM, Hurt EM, Zhao H, Averett L, Yang L, Wilson WH, Jaffe ES, Simon R, Klausner RD, Powell J, Duffey PL, Longo DL, Greiner TC, Weisenburger DD, Sanger WG, Dave BJ, Lynch JC, Vose J, Armitage JO, Montserrat E, López-Guillermo A, Grogan TM, Miller TP, LeBlanc M, Ott G, Kvaloy S, Delabie J, Holte H, Krajci P, Stokke T, Staudt LM; Lymphoma/Leukemia Molecular Profiling Project.

N Engl J Med. 2002 Jun 20;346(25):1937-47.

PMID: 12075054 [PubMed - indexed for MEDLINE]

6:

Algorithmic fusion of gene expression profiling for diffuse large B-cell lymphoma outcome prediction.

Zhu Q, Cui H, Cao K, Chan WC.

IEEE Trans Inf Technol Biomed. 2004 Jun;8(2):79-88.

PMID: 15217252 [PubMed - indexed for MEDLINE]

7:

Methods for evaluating clustering algorithms for gene expression data using a reference set of functional classes.

Datta S, Datta S.

BMC Bioinformatics. 2006 Aug 31;7:397.

PMID: 16945146 [PubMed - indexed for MEDLINE]

8:

A gene expression-based method to diagnose clinically distinct subgroups of diffuse large B cell lymphoma.

Wright G, Tan B, Rosenwald A, Hurt EH, Wiestner A, Staudt LM.

Proc Natl Acad Sci U S A. 2003 Aug 19;100(17):9991-6. Epub 2003 Aug 4.

PMID: 12900505 [PubMed - indexed for MEDLINE]

9:

Iterative class discovery and feature selection using Minimal Spanning Trees.

Varma S, Simon R.

BMC Bioinformatics. 2004 Sep 8;5:126.

PMID: 15355552 [PubMed - indexed for MEDLINE]

10:

DNA microarray data and contextual analysis of correlation graphs.

Rougemont J, Hingamp P.

BMC Bioinformatics. 2003 Apr 29;4:15. Epub 2003 Apr 29.

PMID: 12720549 [PubMed - indexed for MEDLINE]

11:

Prediction of survival in diffuse large-B-cell lymphoma based on the expression of six genes.

Lossos IS, Czerwinski DK, Alizadeh AA, Wechser MA, Tibshirani R, Botstein D, Levy R.

N Engl J Med. 2004 Apr 29;350(18):1828-37.

PMID: 15115829 [PubMed - indexed for MEDLINE]

12:

Clinical quantitation of diagnostic and predictive gene expression levels in follicular and diffuse large B-cell lymphoma by RT-PCR gene expression profiling.

Sakhinia E, Glennie C, Hoyland JA, Menasce LP, Brady G, Miller C, Radford JA, Byers RJ.

Blood. 2007 May 1;109(9):3922-8. Epub 2007 Jan 25.

PMID: 17255358 [PubMed - indexed for MEDLINE]

13:

Effect of data normalization on fuzzy clustering of DNA microarray data.

Kim SY, Lee JW, Bae JS.

BMC Bioinformatics. 2006 Mar 14;7:134.

PMID: 16533412 [PubMed - indexed for MEDLINE]

14:

Biclustering of gene expression data by Non-smooth Non-negative Matrix Factorization.

Carmona-Saez P, Pascual-Marqui RD, Tirado F, Carazo JM, Pascual-Montano A.

BMC Bioinformatics. 2006 Feb 17;7:78.

PMID: 16503973 [PubMed - indexed for MEDLINE]

15:

Reliable classification of two-class cancer data using evolutionary algorithms.

Deb K, Raji Reddy A.

Biosystems. 2003 Nov;72(1-2):111-29.

PMID: 14642662 [PubMed - indexed for MEDLINE]

16:

K-ary clustering with optimal leaf ordering for gene expression data.

Bar-Joseph Z, Demaine ED, Gifford DK, Srebro N, Hamel AM, Jaakkola TS.

Bioinformatics. 2003 Jun 12;19(9):1070-8.

PMID: 12801867 [PubMed - indexed for MEDLINE]

17:

Supervised clustering of genes.

Dettling M, Bühlmann P.

Genome Biol. 2002;3(12):RESEARCH0069. Epub 2002 Nov 25.

PMID: 12537558 [PubMed - indexed for MEDLINE]

18:

Expression profiling of human renal carcinomas with functional taxonomic analysis.

Gieseg MA, Cody T, Man MZ, Madore SJ, Rubin MA, Kaldjian EP.

BMC Bioinformatics. 2002 Sep 30;3:26.

PMID: 12356337 [PubMed - indexed for MEDLINE]

19:

Identifying superficial, muscle-invasive, and metastasizing transitional cell carcinoma of the bladder: use of cDNA array analysis of gene expression profiles.

Modlich O, Prisack HB, Pitschke G, Ramp U, Ackermann R, Bojar H, Vögeli TA, Grimm MO.

Clin Cancer Res. 2004 May 15;10(10):3410-21.

PMID: 15161696 [PubMed - indexed for MEDLINE]

20:

Attribute clustering for grouping, selection, and classification of gene expression data.

Au WH, Chan KC, Wong AK, Wang Y.

IEEE/ACM Trans Comput Biol Bioinform. 2005 Apr-Jun;2(2):83-101. Erratum in: IEEE/ACM Trans Comput Biol Bioinform. 2007 Jan-Mar;4(1):157.

PMID: 17044174 [PubMed - indexed for MEDLINE]

Items 1 - 20 of 134
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