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Items 1 - 20 of 157
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1:

Evidence for symmetric chromosomal inversions around the replication origin in bacteria.

Eisen JA, Heidelberg JF, White O, Salzberg SL.

Genome Biol. 2000;1(6):RESEARCH0011. Epub 2000 Dec 4.

PMID: 11178265 [PubMed - indexed for MEDLINE]

2:

Dynamics of genome rearrangement in bacterial populations.

Darling AE, Miklós I, Ragan MA.

PLoS Genet. 2008 Jul 18;4(7):e1000128.

PMID: 18650965 [PubMed - indexed for MEDLINE]

3:

Selection for chromosome architecture in bacteria.

Hendrickson H, Lawrence JG.

J Mol Evol. 2006 May;62(5):615-29. Epub 2006 Apr 11.

PMID: 16612541 [PubMed - indexed for MEDLINE]

4:

Genome alignment, evolution of prokaryotic genome organization, and prediction of gene function using genomic context.

Wolf YI, Rogozin IB, Kondrashov AS, Koonin EV.

Genome Res. 2001 Mar;11(3):356-72.

PMID: 11230160 [PubMed - indexed for MEDLINE]

5:

In silico prediction of the origin of replication among bacteria: a case study of Bacteroides thetaiotaomicron.

Pallejà A, Guzman E, Garcia-Vallvé S, Romeu A.

OMICS. 2008 Sep;12(3):201-10.

PMID: 18582175 [PubMed - indexed for MEDLINE]

6:

CGAT: a comparative genome analysis tool for visualizing alignments in the analysis of complex evolutionary changes between closely related genomes.

Uchiyama I, Higuchi T, Kobayashi I.

BMC Bioinformatics. 2006 Oct 24;7:472.

PMID: 17062155 [PubMed - indexed for MEDLINE]

7:

Chromosomal constraints in Gram-positive bacteria revealed by artificial inversions.

Campo N, Dias MJ, Daveran-Mingot ML, Ritzenthaler P, Le Bourgeois P.

Mol Microbiol. 2004 Jan;51(2):511-22.

PMID: 14756790 [PubMed - indexed for MEDLINE]

8:

PCR-based identification of Vibrio cholerae and the closely related species Vibrio mimicus using the large chromosomal ori sequence of Vibrio cholerae.

Saha A, Deb R, Shah S, Ramamurthy T, Shinoda S, Mukhophadyay AK, Bhadra RK.

FEMS Microbiol Lett. 2006 Apr;257(1):84-91.

PMID: 16553836 [PubMed - indexed for MEDLINE]

9:

Spontaneous recombination between homologous prophage regions causes large-scale inversions within the Escherichia coli O157:H7 chromosome.

Iguchi A, Iyoda S, Terajima J, Watanabe H, Osawa R.

Gene. 2006 May 10;372:199-207. Epub 2006 Mar 3.

PMID: 16516407 [PubMed - indexed for MEDLINE]

10:

Chromosome structuring limits genome plasticity in Escherichia coli.

Esnault E, Valens M, Espéli O, Boccard F.

PLoS Genet. 2007 Dec;3(12):e226.

PMID: 18085828 [PubMed - indexed for MEDLINE]

11:

M-GCAT: interactively and efficiently constructing large-scale multiple genome comparison frameworks in closely related species.

Treangen TJ, Messeguer X.

BMC Bioinformatics. 2006 Oct 5;7:433.

PMID: 17022809 [PubMed - indexed for MEDLINE]

12:

Systematic determination of the mosaic structure of bacterial genomes: species backbone versus strain-specific loops.

Chiapello H, Bourgait I, Sourivong F, Heuclin G, Gendrault-Jacquemard A, Petit MA, El Karoui M.

BMC Bioinformatics. 2005 Jul 12;6:171.

PMID: 16011797 [PubMed - indexed for MEDLINE]

13:

Comparison of genome structures of vibrios, bacteria possessing two chromosomes.

Tagomori K, Iida T, Honda T.

J Bacteriol. 2002 Aug;184(16):4351-8.

PMID: 12142404 [PubMed - indexed for MEDLINE]

14:

Dynamic bacterial genome organization.

Kolstø AB.

Mol Microbiol. 1997 Apr;24(2):241-8. Review.

PMID: 9159511 [PubMed - indexed for MEDLINE]

15:

Genome sequence of Chlamydophila caviae (Chlamydia psittaci GPIC): examining the role of niche-specific genes in the evolution of the Chlamydiaceae.

Read TD, Myers GS, Brunham RC, Nelson WC, Paulsen IT, Heidelberg J, Holtzapple E, Khouri H, Federova NB, Carty HA, Umayam LA, Haft DH, Peterson J, Beanan MJ, White O, Salzberg SL, Hsia RC, McClarty G, Rank RG, Bavoil PM, Fraser CM.

Nucleic Acids Res. 2003 Apr 15;31(8):2134-47.

PMID: 12682364 [PubMed - indexed for MEDLINE]

16:

Chromosome evolution in the Thermotogales: large-scale inversions and strain diversification of CRISPR sequences.

DeBoy RT, Mongodin EF, Emerson JB, Nelson KE.

J Bacteriol. 2006 Apr;188(7):2364-74.

PMID: 16547022 [PubMed - indexed for MEDLINE]

17:

Whole-genome sequencing of staphylococcus haemolyticus uncovers the extreme plasticity of its genome and the evolution of human-colonizing staphylococcal species.

Takeuchi F, Watanabe S, Baba T, Yuzawa H, Ito T, Morimoto Y, Kuroda M, Cui L, Takahashi M, Ankai A, Baba S, Fukui S, Lee JC, Hiramatsu K.

J Bacteriol. 2005 Nov;187(21):7292-308.

PMID: 16237012 [PubMed - indexed for MEDLINE]

18:

Gene sequences useful for predicting relatedness of whole genomes in bacteria.

Zeigler DR.

Int J Syst Evol Microbiol. 2003 Nov;53(Pt 6):1893-900.

PMID: 14657120 [PubMed - indexed for MEDLINE]

19:

Gene location and bacterial sequence divergence.

Mira A, Ochman H.

Mol Biol Evol. 2002 Aug;19(8):1350-8.

PMID: 12140247 [PubMed - indexed for MEDLINE]

20:

Repeated sequences in bacterial chromosomes and plasmids: a glimpse from sequenced genomes.

Romero D, Martínez-Salazar J, Ortiz E, Rodríguez C, Valencia-Morales E.

Res Microbiol. 1999 Nov-Dec;150(9-10):735-43. Review.

PMID: 10673011 [PubMed - indexed for MEDLINE]

Items 1 - 20 of 157
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