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Items 1 - 20 of 120
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1:

Genome sequences and great expectations.

Iliopoulos I, Tsoka S, Andrade MA, Janssen P, Audit B, Tramontano A, Valencia A, Leroy C, Sander C, Ouzounis CA.

Genome Biol. 2001;2(1):INTERACTIONS0001. Epub 2000 Dec 29.

PMID: 11178275 [PubMed - indexed for MEDLINE]

2:

Gene discovery in the hamster: a comparative genomics approach for gene annotation by sequencing of hamster testis cDNAs.

Oduru S, Campbell JL, Karri S, Hendry WJ, Khan SA, Williams SC.

BMC Genomics. 2003 Jun 3;4(1):22.

PMID: 12783626 [PubMed - indexed for MEDLINE]

4:

Comparative genomics of Arabidopsis and maize: prospects and limitations.

Brendel V, Kurtz S, Walbot V.

Genome Biol. 2002;3(3):REVIEWS1005. Epub 2002 Feb 14. Review.

PMID: 11897028 [PubMed - indexed for MEDLINE]

5:

Biosequence exegesis.

Boguski MS.

Science. 1999 Oct 15;286(5439):453-5.

PMID: 10521334 [PubMed - indexed for MEDLINE]

6:

Genome annotation past, present, and future: how to define an ORF at each locus.

Brent MR.

Genome Res. 2005 Dec;15(12):1777-86. Review.

PMID: 16339376 [PubMed - indexed for MEDLINE]

7:

Whole-genome re-sequencing.

Bentley DR.

Curr Opin Genet Dev. 2006 Dec;16(6):545-52. Epub 2006 Oct 18. Review.

PMID: 17055251 [PubMed - indexed for MEDLINE]

8:

An initial strategy for the systematic identification of functional elements in the human genome by low-redundancy comparative sequencing.

Margulies EH, Vinson JP; NISC Comparative Sequencing Program, Miller W, Jaffe DB, Lindblad-Toh K, Chang JL, Green ED, Lander ES, Mullikin JC, Clamp M.

Proc Natl Acad Sci U S A. 2005 Mar 29;102(13):4795-800. Epub 2005 Mar 18.

PMID: 15778292 [PubMed - indexed for MEDLINE]

9:

Applications of InterPro in protein annotation and genome analysis.

Biswas M, O'Rourke JF, Camon E, Fraser G, Kanapin A, Karavidopoulou Y, Kersey P, Kriventseva E, Mittard V, Mulder N, Phan I, Servant F, Apweiler R.

Brief Bioinform. 2002 Sep;3(3):285-95.

PMID: 12230037 [PubMed - indexed for MEDLINE]

10:

Tag-based approaches for transcriptome research and genome annotation.

Harbers M, Carninci P.

Nat Methods. 2005 Jul;2(7):495-502. Review.

PMID: 15973418 [PubMed - indexed for MEDLINE]

11:

Genome-wide high-throughput screens in functional genomics.

Friedman A, Perrimon N.

Curr Opin Genet Dev. 2004 Oct;14(5):470-6. Review.

PMID: 15380236 [PubMed - indexed for MEDLINE]

12:

A genome annotation-driven approach to cloning the human ORFeome.

Collins JE, Wright CL, Edwards CA, Davis MP, Grinham JA, Cole CG, Goward ME, Aguado B, Mallya M, Mokrab Y, Huckle EJ, Beare DM, Dunham I.

Genome Biol. 2004;5(10):R84. Epub 2004 Sep 30.

PMID: 15461802 [PubMed - indexed for MEDLINE]

13:

Shotgun sequence assembly and recent segmental duplications within the human genome.

She X, Jiang Z, Clark RA, Liu G, Cheng Z, Tuzun E, Church DM, Sutton G, Halpern AL, Eichler EE.

Nature. 2004 Oct 21;431(7011):927-30.

PMID: 15496912 [PubMed - indexed for MEDLINE]

14:

The truth about mouse, human, worms and yeast.

Nelson DR, Nebert DW.

Hum Genomics. 2004 Jan;1(2):146-9.

PMID: 15601543 [PubMed - indexed for MEDLINE]

15:

AUGUSTUS at EGASP: using EST, protein and genomic alignments for improved gene prediction in the human genome.

Stanke M, Tzvetkova A, Morgenstern B.

Genome Biol. 2006;7 Suppl 1:S11.1-8. Epub 2006 Aug 7.

PMID: 16925833 [PubMed - indexed for MEDLINE]

16:

Genomics.

Baba Y.

Anal Bioanal Chem. 2002 Jan;372(1):14-5. Epub 2001 Dec 8. No abstract available.

PMID: 11939183 [PubMed - indexed for MEDLINE]

17:

Re-annotation of the genome sequence of Mycobacterium tuberculosis H37Rv.

Camus JC, Pryor MJ, Médigue C, Cole ST.

Microbiology. 2002 Oct;148(Pt 10):2967-73.

PMID: 12368430 [PubMed - indexed for MEDLINE]

18:

Ab initio identification of putative human transcription factor binding sites by comparative genomics.

Corà D, Herrmann C, Dieterich C, Di Cunto F, Provero P, Caselle M.

BMC Bioinformatics. 2005 May 2;6:110.

PMID: 15865625 [PubMed - indexed for MEDLINE]

19:

Whole-genome shotgun assembly and analysis of the genome of Fugu rubripes.

Aparicio S, Chapman J, Stupka E, Putnam N, Chia JM, Dehal P, Christoffels A, Rash S, Hoon S, Smit A, Gelpke MD, Roach J, Oh T, Ho IY, Wong M, Detter C, Verhoef F, Predki P, Tay A, Lucas S, Richardson P, Smith SF, Clark MS, Edwards YJ, Doggett N, Zharkikh A, Tavtigian SV, Pruss D, Barnstead M, Evans C, Baden H, Powell J, Glusman G, Rowen L, Hood L, Tan YH, Elgar G, Hawkins T, Venkatesh B, Rokhsar D, Brenner S.

Science. 2002 Aug 23;297(5585):1301-10. Epub 2002 Jul 25.

PMID: 12142439 [PubMed - indexed for MEDLINE]

20:

[Correction of five different types of errors of model REFSEQs appeared in NCBI human gene database only by using two novel human genes C17orf32 and ZNF362]

Zhang DL, Li YD, Ji L.

Yi Chuan Xue Bao. 2004 Apr;31(4):325-34. Chinese.

PMID: 15487498 [PubMed - indexed for MEDLINE]

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